STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ46946.1PFAM: Domain of unknown function DUF29; InterPro IPR002636; KEGG: syn:slr1811 hypothetical protein; PFAM: protein of unknown function DUF29; SPTR: Slr1811 protein. (154 aa)    
Predicted Functional Partners:
AFZ46947.1
PFAM: Domain of unknown function DUF29; InterPro IPR002636; KEGG: syn:slr1812 hypothetical protein; PFAM: protein of unknown function DUF29; SPTR: Slr1812 protein.
 
    
0.707
AFZ47778.1
PFAM: Protein of unknown function (DUF820); COGs: COG4636 conserved hypothetical protein; InterPro IPR008538; KEGG: syn:slr2084 hypothetical protein; PFAM: protein of unknown function DUF820; SPTR: Slr2084 protein.
  
     0.558
AFZ46965.1
PFAM: XisI protein; InterPro IPR014968; KEGG: mar:MAE_20250 hypothetical protein; PFAM: XisI protein; SPTR: Genome sequencing data, contig C299.
  
     0.508
AFZ47849.1
PFAM: Protein of unknown function (DUF820); COGs: COG4636 conserved hypothetical protein; InterPro IPR008538; KEGG: cyc:PCC7424_4107 protein of unknown function DUF820; PFAM: protein of unknown function DUF820; SPTR: Putative uncharacterized protein.
  
     0.504
AFZ47010.1
KEGG: cyt:cce_1644 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.489
AFZ46968.1
KEGG: npu:Npun_R5978 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.485
AFZ47704.1
PFAM: Protein of unknown function (DUF820); COGs: COG4636 conserved hypothetical protein; InterPro IPR008538; KEGG: cyc:PCC7424_1832 protein of unknown function DUF820; PFAM: protein of unknown function DUF820; SPTR: Putative uncharacterized protein.
  
     0.465
AFZ46948.1
PFAM: Protein of unknown function (DUF2862); KEGG: cyh:Cyan8802_1890 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.456
AFZ46174.1
KEGG: cyt:cce_2631 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.453
AFZ46945.1
Protein of unknown function DUF395 YeeE/YedE; PFAM: YeeE/YedE family (DUF395); InterPro IPR007272; KEGG: amr:AM1_3239 YeeE/YedE family protein, putative; PFAM: protein of unknown function DUF395 YeeE/YedE; SPTR: Putative uncharacterized protein.
       0.443
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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