STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ46951.1KEGG: cyt:cce_4700 hypothetical protein; SPTR: Putative uncharacterized protein. (196 aa)    
Predicted Functional Partners:
AFZ48245.1
KEGG: cyt:cce_4425 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.727
AFZ48557.1
PFAM: Protein of unknown function (DUF1232); COGs: COG3339 conserved hypothetical protein; InterPro IPR010652; KEGG: cyh:Cyan8802_1839 protein of unknown function DUF1232; PFAM: protein of unknown function DUF1232; SPTR: Putative uncharacterized protein.
  
     0.699
AFZ48277.1
PFAM: Protein of unknown function (DUF751); InterPro IPR008470; KEGG: syp:SYNPCC7002_A2567 hypothetical protein; PFAM: protein of unknown function DUF751; SPTR: Putative uncharacterized protein.
  
     0.672
AFZ47498.1
KEGG: cyh:Cyan8802_3018 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.638
AFZ46863.1
KEGG: npu:Npun_DR014 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.636
AFZ46460.1
KEGG: ter:Tery_3938 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.635
AFZ48342.1
KEGG: cyc:PCC7424_0302 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.625
AFZ46412.1
KEGG: cyc:PCC7424_4388 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.606
AFZ48115.1
PFAM: CheW-like domain; InterPro IPR002545; KEGG: cyc:PCC7424_2779 CheW protein; PFAM: CheW domain protein; SMART: CheW domain protein; SPTR: CheW protein.
  
     0.605
AFZ47078.1
KEGG: ana:alr2346 hypothetical protein; SPTR: Alr2346 protein.
  
     0.563
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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