STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ46961.1PFAM: XisI protein; InterPro IPR014968; KEGG: cyp:PCC8801_1892 XisI protein; PFAM: XisI protein; SPTR: FdxN element excision controlling factor protein. (113 aa)    
Predicted Functional Partners:
AFZ46962.1
PFAM: XisH protein; InterPro IPR014919; KEGG: cyt:cce_3285 putative FdxN element excision controlling factor protein; PFAM: XisH protein; SPTR: FdxN element excision controlling factor XisH.
 
     0.951
AFZ46966.1
PFAM: XisH protein; InterPro IPR014919; KEGG: mar:MAE_20240 FdxN element excision controlling factor protein; PFAM: XisH protein; SPTR: FdxN element excision controlling factor protein.
 
     0.865
AFZ48740.1
PFAM: XisH protein; InterPro IPR014919; KEGG: syp:SYNPCC7002_F0025 excision controlling factor protein, XisH like protein; PFAM: XisH protein; SPTR: Excision controlling factor protein, XisH like protein.
  
   
 0.774
AFZ48772.1
PFAM: Protein of unknown function (DUF2887); TIGRFAM: conserved hypothetical protein (putative transposase or invertase); COGs: COG5464 conserved hypothetical protein; InterPro IPR010106; KEGG: cyh:Cyan8802_2672 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.615
AFZ47849.1
PFAM: Protein of unknown function (DUF820); COGs: COG4636 conserved hypothetical protein; InterPro IPR008538; KEGG: cyc:PCC7424_4107 protein of unknown function DUF820; PFAM: protein of unknown function DUF820; SPTR: Putative uncharacterized protein.
  
     0.610
AFZ46963.1
KEGG: syp:SYNPCC7002_A1686 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.574
AFZ46965.1
PFAM: XisI protein; InterPro IPR014968; KEGG: mar:MAE_20250 hypothetical protein; PFAM: XisI protein; SPTR: Genome sequencing data, contig C299.
 
    
0.533
AFZ46530.1
KEGG: amr:AM1_3843 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.505
AFZ48060.1
KEGG: cyt:cce_3943 hypothetical protein; SPTR: Genome sequencing data, contig C275.
  
     0.477
AFZ46964.1
KEGG: cyt:cce_1065 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.447
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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