STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ46977.1KEGG: ter:Tery_1601 hypothetical protein; SPTR: Putative uncharacterized protein. (159 aa)    
Predicted Functional Partners:
AFZ48092.1
KEGG: cyc:PCC7424_2998 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.706
AFZ48787.1
KEGG: cyc:PCC7424_1178 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.692
AFZ46145.1
KEGG: cyp:PCC8801_1938 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.687
AFZ46976.1
KEGG: cyt:cce_2996 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.666
AFZ47159.1
PFAM: Protein of unknown function (DUF3571); KEGG: cyt:cce_0819 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.654
AFZ46559.1
TIGRFAM: dnd system-associated protein 4; KEGG: cyt:cce_2948 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.614
AFZ48029.1
SMC domain protein; TIGRFAM: DNA sulfur modification protein DndD; COGs: COG0419 ATPase involved in DNA repair; InterPro IPR003395; KEGG: cyh:Cyan8802_2920 hypothetical protein; PFAM: SMC domain protein; SPTR: Putative uncharacterized protein.
  
     0.609
AFZ46650.1
KEGG: cyt:cce_1492 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.592
AFZ47350.1
TIGRFAM: DNA sulfur modification protein DndD; COGs: COG0419 ATPase involved in DNA repair; InterPro IPR017599:IPR017871; KEGG: cyt:cce_0213 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: DNA sulfur modification protein DndD.
  
     0.591
AFZ46337.1
DNA sulfur modification protein DndE; PFAM: Domain of unknown function (DUF1832); TIGRFAM: DNA sulfur modification protein DndE; InterPro IPR014969; KEGG: ana:alr4922 hypothetical protein; PFAM: Domain of unknown function DUF1832; SPTR: Alr4922 protein; TIGRFAM: DNA sulfur modification protein DndE.
  
     0.590
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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