STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ46985.1KEGG: cyt:cce_0018 hypothetical protein; SPTR: Putative uncharacterized protein. (217 aa)    
Predicted Functional Partners:
AFZ46264.1
AMP-dependent synthetase and ligase; PFAM: AMP-binding enzyme; COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR020845:IPR000873; KEGG: cyc:PCC7424_1874 beta-ketoacyl synthase; PFAM: AMP-dependent synthetase and ligase; SPTR: Beta-ketoacyl synthase.
 
 
 0.721
AFZ46265.1
Beta-ketoacyl synthase; PFAM: Acyl transferase domain; Phosphopantetheine attachment site; KR domain; Beta-ketoacyl synthase, N-terminal domain; AMP-binding enzyme; Sulfotransferase domain; Beta-ketoacyl synthase, C-terminal domain; COGs: COG3321 Polyketide synthase modules and related protein; InterProIPR000639:IPR009081:IPR006162:IPR018201:IPR 000873:IPR006163:IPR014030:IPR014031:IPR014043:IPR013968:I PR000863:IPR000073; KEGG: cyc:PCC7424_1874 beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase; phosphopantetheine-binding; AMP-dependent synthetase and ligase; Acyl transferase; KR do [...]
  
 
 0.684
AFZ48497.1
PFAM: Protein of unknown function (DUF3148); KEGG: npu:Npun_F2424 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.655
AFZ46986.1
PFAM: Peptidase family M50; InterPro IPR008915; KEGG: cyc:PCC7424_4003 peptidase M50; PFAM: peptidase M50; SPTR: Peptidase M50.
 
     0.646
AFZ46837.1
Hypothetical protein; PFAM: Domain of unknown function (DUF3598); KEGG: ana:all1756 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.635
AFZ47458.1
KEGG: mar:MAE_04000 glycogen debranching enzyme; SPTR: Glycogen debranching enzyme.
  
     0.613
AFZ48758.1
PFAM: Pyridine nucleotide-disulphide oxidoreductase; COGs: COG0446 NAD(FAD)-dependent dehydrogenase; InterPro IPR013027; KEGG: syn:slr0876 hypothetical protein; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: Slr0876 protein.
   
 0.593
AFZ46413.1
KEGG: cyn:Cyan7425_0757 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.577
AFZ46984.1
PFAM: Bacterial type II secretion system protein F domain; COGs: COG1459 Type II secretory pathway component PulF; InterPro IPR001992:IPR003004:IPR018076; KEGG: cyh:Cyan8802_1638 type II secretion system protein; PFAM: Type II secretion system F domain; SPTR: Type II secretion system protein.
       0.575
AFZ47762.1
KEGG: cyp:PCC8801_0034 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.565
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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