STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ46991.1PFAM: Stage II sporulation protein E (SpoIIE); KEGG: dac:Daci_4196 hypothetical protein; SPTR: Putative uncharacterized protein. (239 aa)    
Predicted Functional Partners:
AFZ47998.1
Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
  
  
 0.783
AFZ46992.1
PFAM: von Willebrand factor type A domain; COGs: COG4245 Uncharacterized protein encoded in toxicity protection region of plasmid R478 contains von Willebrand factor (vWF) domain; InterPro IPR002035; KEGG: dat:HRM2_14740 hypothetical protein; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; SPTR: Phage/colicin/tellurite resistance cluster TerY protein, putative.
  
    0.715
AFZ46990.1
PFAM: Protein kinase domain; COGs: COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains; InterPro IPR002290:IPR000719; KEGG: pna:Pnap_4257 protein kinase; SMART: serine/threonine protein kinase; SPTR: Putative uncharacterized protein.
     
 0.689
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
  
   0.633
AFZ46989.1
COGs: COG1112 Superfamily I DNA and RNA helicase and helicase subunits; KEGG: pna:Pnap_4258 superfamily I DNA/RNA helicase; SPTR: Putative uncharacterized protein.
       0.566
gcvT
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine.
    
  0.554
AFZ46988.1
KEGG: xbo:XBJ1_1482 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.467
AFZ48090.1
Diguanylate cyclase with PAS/PAC and GAF sensors; PFAM: Protein kinase domain; GGDEF domain; GAF domain; NB-ARC domain; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; COGs: COG3899 ATPase; InterProIPR017442:IPR003018:IPR013767:IPR000160:IPR 000719:IPR000014:IPR000700:IPR020635:IPR002290; KEGG: mar:MAE_22800 serine/threonine kinase; PFAM: GGDEF domain containing protein; Serine/threonine-protein kinase-like domain; GAF domain protein; PAS fold domain protein; SMART: GGDEF domain containing protein; serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domai [...]
  
 
 0.412
AFZ47192.1
Protein of unknown function UPF0052 and CofD; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.
   
  
 0.404
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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