STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ47014.1Hypothetical protein; InterPro IPR017964; KEGG: cyt:cce_3625 hypothetical protein; SPTR: Putative uncharacterized protein. (113 aa)    
Predicted Functional Partners:
AFZ48730.1
KEGG: syp:SYNPCC7002_A0300 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.765
AFZ47523.1
PFAM: Protein of unknown function (DUF2555); InterPro IPR019678; KEGG: cyt:cce_2060 hypothetical protein; PFAM: Protein of unknown function DUF2555; SPTR: Putative uncharacterized protein; manually curated.
  
     0.762
AFZ48335.1
KEGG: cyc:PCC7424_3354 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.756
AFZ48743.1
KEGG: cyt:cce_4144 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.742
AFZ47310.1
PFAM: Protein of unknown function (DUF2396); TIGRFAM: TIGR02652 family protein; InterPro IPR013472; KEGG: cyh:Cyan8802_3023 hypothetical protein; PFAM: Conserved hypothetical protein CHP02652; SPTR: Putative uncharacterized protein.
  
     0.729
AFZ47015.1
AAA ATPase central domain protein; PFAM: ATPase family associated with various cellular activities (AAA); COGs: COG0464 ATPase of the AAA+ class; InterPro IPR003593:IPR003959; KEGG: cyh:Cyan8802_3458 AAA ATPase central domain protein; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; SPTR: AAA ATPase central domain protein.
     
 0.727
AFZ46058.1
Hypothetical protein; InterPro IPR020633; KEGG: cyc:PCC7424_4658 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.703
AFZ46210.1
Carbon dioxide concentrating mechanism protein; PFAM: Bacterial transferase hexapeptide (three repeats); InterPro IPR001451; KEGG: mar:MAE_47900 carbon dioxide concentrating mechanism protein; SPTR: Genome sequencing data, contig C303.
  
     0.700
AFZ46345.1
PFAM: Alpha/beta hydrolase of unknown function (DUF1400); InterPro IPR010802; KEGG: cyt:cce_1419 hypothetical protein; PFAM: protein of unknown function DUF1400; SPTR: Putative uncharacterized protein.
  
     0.680
AFZ47495.1
PFAM: Domain of unknown function (DUF1830); InterPro IPR014964:IPR018117; KEGG: syp:SYNPCC7002_A2395 hypothetical protein; PFAM: Domain of unknown function DUF1830; SPTR: Putative uncharacterized protein.
  
     0.663
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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