STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ47019.1PFAM: Fic/DOC family; TIGRFAM: death-on-curing family protein; COGs: COG3654 Prophage maintenance system killer protein; InterPro IPR006440:IPR003812; KEGG: rlg:Rleg_1257 death-on-curing family protein; PFAM: filamentation induced by cAMP protein Fic; SPTR: Death-on-curing family protein; TIGRFAM: death-on-curing family protein. (129 aa)    
Predicted Functional Partners:
AFZ47018.1
Addiction module antidote; PFAM: SpoVT / AbrB like domain; TIGRFAM: putative addiction module antidote; InterPro IPR013432:IPR007159; KEGG: hna:Hneap_1983 addiction module antidote; PFAM: SpoVT/AbrB domain-containing protein; SPTR: Addiction module antidote; TIGRFAM: addiction module antidote.
 
   
 0.953
AFZ47020.1
(SSU ribosomal protein S18P)-alanine acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18.
       0.636
AFZ47017.1
PFAM: ABC transporter; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593:IPR003439:IPR017871; KEGG: ava:Ava_1452 ABC transporter-like; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Heme ABC exporter, ATP-binding protein CcmA, putative.
       0.512
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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