STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ47054.1KEGG: cyc:PCC7424_5653 hypothetical protein; SPTR: Putative uncharacterized protein. (128 aa)    
Predicted Functional Partners:
AFZ47055.1
Hypothetical protein; KEGG: pfh:PFHG_04515 conserved hypothetical protein; SPTR: Putative uncharacterized protein.
       0.603
AFZ47056.1
Hypothetical protein; COGs: COG2402 nucleic acid-binding protein contains PIN domain; KEGG: mar:MAE_32560 hypothetical protein; SPTR: PilT-like protein.
       0.603
AFZ47057.1
KEGG: cyn:Cyan7425_5332 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.592
AFZ47053.1
CRISPR-associated protein, Cmr4 family; PFAM: RAMP superfamily; COGs: COG1336 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily); InterPro IPR005537; KEGG: cyn:Cyan7425_5330 protein of unknown function DUF324; PFAM: protein of unknown function DUF324; SPTR: Putative uncharacterized protein.
       0.523
AFZ47052.1
PFAM: CRISPR-associated protein (Cas_Cmr3); KEGG: cyn:Cyan7425_5329 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.522
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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