STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ47064.1PFAM: Domain of unknown function (DUF1823); InterPro IPR014952; KEGG: cyh:Cyan8802_3350 domain of unknown function DUF1823; PFAM: Domain of unknown function DUF1823; SPTR: Putative uncharacterized protein. (121 aa)    
Predicted Functional Partners:
AFZ46428.1
PFAM: Protein of unknown function (DUF3146); KEGG: cyh:Cyan8802_1435 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.771
AFZ48085.1
PFAM: Protein of unknown function (DUF2997); KEGG: cyc:PCC7424_0837 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.743
AFZ48563.1
Hypothetical protein; InterPro IPR020885; KEGG: cyp:PCC8801_1959 hypothetical protein; SPTR: UPF0367 protein PCC8801_1959; Belongs to the UPF0367 family.
  
     0.722
AFZ47314.1
PFAM: Hypothetical chloroplast protein Ycf34; InterPro IPR019656; KEGG: cyc:PCC7424_0185 hypothetical protein; PFAM: Hypothetical chloroplast protein Ycf34; SPTR: Putative uncharacterized protein.
  
     0.694
AFZ47506.1
PFAM: Domain of unknown function (DUF1815); InterPro IPR014943; KEGG: cyn:Cyan7425_1036 hypothetical protein; PFAM: Domain of unknown function DUF1815; SPTR: Putative uncharacterized protein.
  
     0.691
psbV
Cytochrome c-550; Low-potential cytochrome c that plays a role in the oxygen- evolving complex of photosystem II.
  
     0.666
AFZ47793.1
KEGG: cyc:PCC7424_0174 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.665
AFZ46213.1
PFAM: Protein of unknown function (DUF3110); KEGG: cyc:PCC7424_4978 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.653
AFZ47111.1
PFAM: Protein of unknown function (DUF2839); KEGG: mar:MAE_46470 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.649
cpcS-2
Protein of unknown function CpeS/Ycf58; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
  
     0.625
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.