STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ47078.1KEGG: ana:alr2346 hypothetical protein; SPTR: Alr2346 protein. (100 aa)    
Predicted Functional Partners:
AFZ45996.1
COGs: COG4980 Gas vesicle protein; KEGG: cyh:Cyan8802_1343 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.757
AFZ47243.1
Hypothetical protein; PFAM: Heavy-metal-associated domain; InterPro IPR006121; KEGG: syp:SYNPCC7002_A0081 copper-binding metallochaperone; SPTR: Heavy metal transport/detoxification protein.
  
     0.747
AFZ47954.1
KEGG: cyc:PCC7424_5184 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.735
AFZ48277.1
PFAM: Protein of unknown function (DUF751); InterPro IPR008470; KEGG: syp:SYNPCC7002_A2567 hypothetical protein; PFAM: protein of unknown function DUF751; SPTR: Putative uncharacterized protein.
  
     0.710
AFZ48051.1
PFAM: Protein of unknown function (DUF3153); KEGG: cyh:Cyan8802_1546 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.702
AFZ48159.1
KEGG: syn:ssl1807 hypothetical protein; SPTR: Ssl1807 protein.
  
     0.702
AFZ47826.1
KEGG: cyn:Cyan7425_1750 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.687
AFZ46678.1
KEGG: cyh:Cyan8802_1198 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.672
AFZ48447.1
KEGG: cyc:PCC7424_4615 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.661
AFZ47458.1
KEGG: mar:MAE_04000 glycogen debranching enzyme; SPTR: Glycogen debranching enzyme.
  
     0.646
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.