STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ47096.1COGs: COG3411 Ferredoxin; KEGG: amr:AM1_B0126 iron-sulfur cluster-binding protein, putative; SPTR: Iron-sulfur cluster-binding protein, putative. (291 aa)    
Predicted Functional Partners:
AFZ47097.1
PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; COGs: COG4206 Outer membrane cobalamin receptor protein; InterPro IPR012910:IPR000531; KEGG: amr:AM1_B0127 TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: TonB-dependent receptor.
 
     0.903
AFZ47095.1
KEGG: ter:Tery_0843 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.642
AFZ47792.1
PFAM: Protein of unknown function (DUF455); KEGG: mar:MAE_19790 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.553
psaJ
Photosystem I reaction centre subunit IX / PsaJ; May help in the organization of the PsaE and PsaF subunits. Belongs to the PsaJ family.
  
     0.455
AFZ46049.1
Hypothetical protein; PFAM: Dynamin family; KEGG: cyt:cce_3124 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.454
AFZ48286.1
TIGRFAM: methyltransferase, FkbM family; InterPro IPR006342; KEGG: gme:Gmet_2335 methyltransferase FkbM; SPTR: Methyltransferase FkbM; TIGRFAM: methyltransferase FkbM family.
  
     0.413
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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