STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ47140.1Protein of unknown function DUF1568; PFAM: Transposase IS200 like; KEGG: cyc:PCC7424_3277 protein of unknown function DUF1568; SPTR: Putative uncharacterized protein. (197 aa)    
Predicted Functional Partners:
AFZ48342.1
KEGG: cyc:PCC7424_0302 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.557
AFZ46989.1
COGs: COG1112 Superfamily I DNA and RNA helicase and helicase subunits; KEGG: pna:Pnap_4258 superfamily I DNA/RNA helicase; SPTR: Putative uncharacterized protein.
  
     0.537
AFZ48772.1
PFAM: Protein of unknown function (DUF2887); TIGRFAM: conserved hypothetical protein (putative transposase or invertase); COGs: COG5464 conserved hypothetical protein; InterPro IPR010106; KEGG: cyh:Cyan8802_2672 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.537
AFZ47975.1
PFAM: SPFH domain / Band 7 family; COGs: COG2268 conserved hypothetical protein; InterPro IPR001107; KEGG: cyc:PCC7424_4040 band 7 protein; PFAM: band 7 protein; SPTR: Band 7 protein.
  
     0.479
AFZ46990.1
PFAM: Protein kinase domain; COGs: COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains; InterPro IPR002290:IPR000719; KEGG: pna:Pnap_4257 protein kinase; SMART: serine/threonine protein kinase; SPTR: Putative uncharacterized protein.
  
    0.465
AFZ47351.1
KEGG: ter:Tery_2508 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.421
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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