STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ47179.1DNA polymerase beta domain protein region; PFAM: Nucleotidyltransferase domain; InterPro IPR002934; KEGG: cyn:Cyan7425_3147 DNA polymerase beta domain protein region; PFAM: DNA polymerase beta domain protein region; SPTR: DNA polymerase beta domain protein region. (88 aa)    
Predicted Functional Partners:
AFZ47180.1
PFAM: Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region; COGs: COG0675 Transposase and inactivated derivatives; InterPro IPR010095; KEGG: cyh:Cyan8802_4630 transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; SPTR: Transposase, IS605 OrfB family; TIGRFAM: transposase, IS605 OrfB family.
 
     0.758
AFZ46611.1
DNA polymerase beta domain protein region; PFAM: Nucleotidyltransferase domain; COGs: COG1669 nucleotidyltransferase; InterPro IPR002934; KEGG: cyt:cce_4349 hypothetical protein; PFAM: DNA polymerase beta domain protein region; SPTR: Putative uncharacterized protein.
  
     0.622
AFZ46610.1
PFAM: Protein of unknown function DUF86; COGs: COG2361 conserved hypothetical protein; InterPro IPR008201; KEGG: mac:MA0101 hypothetical protein; PFAM: protein of unknown function DUF86; SPTR: Putative uncharacterized protein.
 
  
 0.599
AFZ46583.1
PFAM: Protein of unknown function DUF86; COGs: COG2361 conserved hypothetical protein; InterPro IPR008201; KEGG: cyc:PCC7424_5819 protein of unknown function DUF86; PFAM: protein of unknown function DUF86; SPTR: Putative uncharacterized protein.
 
  
 0.594
AFZ47181.1
Lactoylglutathione lyase; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; TIGRFAM: lactoylglutathione lyase; COGs: COG0346 Lactoylglutathione lyase and related lyase; InterPro IPR004361:IPR004360; KEGG: cyc:PCC7424_4951 lactoylglutathione lyase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; PRIAM: Lactoylglutathione lyase; SPTR: Lactoylglutathione lyase; TIGRFAM: lactoylglutathione lyase.
       0.523
AFZ48458.1
PFAM: Protein of unknown function DUF86; COGs: COG2361 conserved hypothetical protein; InterPro IPR008201; KEGG: cyc:PCC7424_3906 protein of unknown function DUF86; PFAM: protein of unknown function DUF86; SPTR: Putative uncharacterized protein.
  
  
 0.458
AFZ48650.1
PFAM: Protein of unknown function DUF86; COGs: COG2361 conserved hypothetical protein; InterPro IPR008201; KEGG: lch:Lcho_0358 hypothetical protein; PFAM: protein of unknown function DUF86; SPTR: Putative uncharacterized protein.
  
  
 0.456
AFZ48749.1
PFAM: PEP-utilising enzyme, mobile domain; Domain of unknown function (DUF205); Pyruvate phosphate dikinase, PEP/pyruvate binding domain; COGs: COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase; InterPro IPR003811:IPR002192:IPR008279; KEGG: cyc:PCC7424_2777 pyruvate phosphate dikinase PEP/pyruvate-binding; PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; protein of unknown function DUF205; PEP-utilising protein mobile region; SPTR: Pyruvate phosphate dikinase PEP/pyruvate-binding.
  
     0.422
AFZ48168.1
KEGG: ava:Ava_2463 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.403
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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