STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ47205.1KEGG: cyc:PCC7424_2002 hypothetical protein; SPTR: Putative uncharacterized protein. (295 aa)    
Predicted Functional Partners:
AFZ47204.1
KEGG: mar:MAE_56770 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.885
AFZ46256.1
PFAM: Protein of unknown function (DUF2993); KEGG: cyt:cce_2484 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.762
AFZ48759.1
KEGG: cyt:cce_3128 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.700
AFZ46897.1
PFAM: Protein of unknown function (DUF1239); InterPro IPR010664; KEGG: cyc:PCC7424_0097 protein of unknown function DUF1239; PFAM: protein of unknown function DUF1239; SPTR: Putative uncharacterized protein.
  
     0.693
AFZ48051.1
PFAM: Protein of unknown function (DUF3153); KEGG: cyh:Cyan8802_1546 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.689
AFZ48519.1
PFAM: Ferrochelatase; COGs: COG0276 Protoheme ferro-lyase (ferrochelatase); InterPro IPR001015; KEGG: cyc:PCC7424_0668 ferrochelatase; PFAM: ferrochelatase; SPTR: Ferrochelatase; Belongs to the ferrochelatase family.
  
     0.682
AFZ46500.1
KEGG: cyc:PCC7424_0760 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.653
AFZ48029.1
SMC domain protein; TIGRFAM: DNA sulfur modification protein DndD; COGs: COG0419 ATPase involved in DNA repair; InterPro IPR003395; KEGG: cyh:Cyan8802_2920 hypothetical protein; PFAM: SMC domain protein; SPTR: Putative uncharacterized protein.
  
     0.647
AFZ46485.1
FAD dependent oxidoreductase; InterPro IPR006076; KEGG: cyt:cce_1780 hypothetical protein; PFAM: FAD dependent oxidoreductase; SPTR: Putative uncharacterized protein.
  
     0.631
AFZ48438.1
PFAM: Protein of unknown function (DUF2993); KEGG: cyt:cce_3140 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.616
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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