STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ47281.1KEGG: cyc:PCC7424_1230 hypothetical protein; SPTR: Putative uncharacterized protein. (117 aa)    
Predicted Functional Partners:
AFZ47698.1
KEGG: cyt:cce_2140 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.751
AFZ47280.1
KEGG: cyt:cce_0643 hypothetical protein; SPTR: RNA polymerase sigma factor.
 
     0.736
AFZ47223.1
PFAM: Protein of unknown function (DUF3352); KEGG: cyc:PCC7424_0630 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.734
AFZ46147.1
KEGG: npu:Npun_F0692 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.733
AFZ48759.1
KEGG: cyt:cce_3128 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.731
AFZ46115.1
KEGG: cyh:Cyan8802_0743 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.718
AFZ47278.1
KEGG: cyt:cce_3936 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.704
AFZ47623.1
KEGG: cyc:PCC7424_2348 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.677
AFZ46678.1
KEGG: cyh:Cyan8802_1198 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.671
AFZ46979.1
KEGG: cyh:Cyan8802_2290 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.636
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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