STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ47287.1PFAM: Phospholipase/Carboxylesterase; COGs: COG0400 esterase; InterPro IPR003140; KEGG: cyh:Cyan8802_4488 phospholipase/carboxylesterase; PFAM: phospholipase/Carboxylesterase; SPTR: Phospholipase/Carboxylesterase. (204 aa)    
Predicted Functional Partners:
AFZ48791.1
KEGG: cyt:cce_3245 hypothetical protein; SPTR: Putative uncharacterized protein.
     
 0.730
AFZ47288.1
PFAM: 3'-5' exonuclease; COGs: COG0349 Ribonuclease D; InterPro IPR002562; KEGG: npu:Npun_F5743 3'-5' exonuclease; PFAM: 3'-5' exonuclease; SMART: 3'-5' exonuclease; SPTR: 3'-5' exonuclease.
       0.718
AFZ47286.1
KEGG: cyu:UCYN_07140 hypothetical protein; SPTR: Similarity. Hypothetical start.
       0.558
AFZ47289.1
WD-40 repeat-containing protein; PFAM: WD domain, G-beta repeat; COGs: COG2319 FOG: WD40 repeat; InterPro IPR001680:IPR019781:IPR019782:IPR017986; KEGG: cyc:PCC7424_3190 WD-40 repeat protein; PFAM: WD40 repeat, subgroup; SPTR: WD-40 repeat protein.
   
   0.478
AFZ46264.1
AMP-dependent synthetase and ligase; PFAM: AMP-binding enzyme; COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR020845:IPR000873; KEGG: cyc:PCC7424_1874 beta-ketoacyl synthase; PFAM: AMP-dependent synthetase and ligase; SPTR: Beta-ketoacyl synthase.
  
 0.459
AFZ46265.1
Beta-ketoacyl synthase; PFAM: Acyl transferase domain; Phosphopantetheine attachment site; KR domain; Beta-ketoacyl synthase, N-terminal domain; AMP-binding enzyme; Sulfotransferase domain; Beta-ketoacyl synthase, C-terminal domain; COGs: COG3321 Polyketide synthase modules and related protein; InterProIPR000639:IPR009081:IPR006162:IPR018201:IPR 000873:IPR006163:IPR014030:IPR014031:IPR014043:IPR013968:I PR000863:IPR000073; KEGG: cyc:PCC7424_1874 beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase; phosphopantetheine-binding; AMP-dependent synthetase and ligase; Acyl transferase; KR do [...]
  
 0.459
AFZ47676.1
GTP-binding protein HSR1-related protein; PFAM: GTPase of unknown function; Domain of unknown function (DUF697); TIGRFAM: small GTP-binding protein domain; COGs: COG1100 GTPase SAR1 and related small G protein; InterPro IPR002917; KEGG: cyc:PCC7424_1616 small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; SPTR: Small GTP-binding protein.
  
 
  0.459
AFZ47714.1
Cl- channel voltage-gated family protein; PFAM: CBS domain; Voltage gated chloride channel; Universal stress protein family; COGs: COG0038 Chloride channel protein EriC; InterPro IPR001807:IPR000644:IPR006016; KEGG: cyt:cce_0078 chloride channel protein; PFAM: Cl- channel voltage-gated family protein; CBS domain containing protein; UspA domain-containing protein; SMART: CBS domain containing protein; SPTR: Chloride channel protein.
   
    0.403
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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