STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ47329.1COGs: COG4995 conserved hypothetical protein; KEGG: cyt:cce_2173 hypothetical protein; SPTR: Putative uncharacterized protein. (457 aa)    
Predicted Functional Partners:
AFZ47330.1
KEGG: amr:AM1_3911 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
AFZ46410.1
PFAM: Surface antigen; POTRA domain, ShlB-type; COGs: COG2831 Hemolysin activation/secretion protein; InterPro IPR013686:IPR000184; KEGG: cyc:PCC7424_1635 polypeptide-transport-associated domain protein ShlB-type; PFAM: surface antigen (D15); Polypeptide-transport-associated domain protein ShlB-type; SPTR: Polypeptide-transport-associated domain protein ShlB-type.
 
     0.702
AFZ47331.1
PFAM: Magnesium chelatase, subunit ChlI; TIGRFAM: Mg chelatase-related protein; COGs: COG0606 ATPase with chaperone activity; InterPro IPR003593:IPR004482:IPR000523; KEGG: cyh:Cyan8802_3181 Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; SMART: AAA ATPase; SPTR: Mg chelatase, subunit ChlI; TIGRFAM: Mg chelatase, subunit ChlI.
       0.455
AFZ48245.1
KEGG: cyt:cce_4425 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.431
AFZ46398.1
KEGG: syn:ssl0294 hypothetical protein; SPTR: UPF0426 protein ssl0294.
  
     0.408
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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