STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ47453.1Hypothetical protein; PFAM: Tubulin/FtsZ family, GTPase domain; InterPro IPR022272; KEGG: ava:Ava_1848 hypothetical protein; SPTR: Putative uncharacterized protein. (1046 aa)    
Predicted Functional Partners:
AFZ47452.1
KEGG: ter:Tery_1706 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.903
AFZ47451.1
Hypothetical protein; PFAM: OmpA family; KEGG: cyh:Cyan8802_4290 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.900
AFZ47454.1
KEGG: mar:MAE_58760 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.551
AFZ47217.1
Hypothetical protein; InterPro IPR002114; KEGG: cyc:PCC7424_3995 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.544
AFZ48425.1
KEGG: cyt:cce_0203 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.499
AFZ48438.1
PFAM: Protein of unknown function (DUF2993); KEGG: cyt:cce_3140 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.495
AFZ45994.1
PFAM: NC domain; PspA/IM30 family; InterPro IPR007157; KEGG: cyc:PCC7424_2236 NC domain protein; PFAM: PspA/IM30 family protein; SPTR: NC domain protein.
 
    0.488
AFZ46652.1
KEGG: cyt:cce_1494 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.456
AFZ47527.1
PFAM: Phycobilisome Linker polypeptide; CpcD/allophycocyanin linker domain; InterPro IPR001297:IPR008213:IPR016470; KEGG: cyp:PCC8801_4529 phycobilisome linker polypeptide; PFAM: Phycobilisome linker polypeptide; CpcD phycobilisome linker domain protein; SPTR: Phycobilisome linker polypeptide:CpcD phycobilisome linker-like; Belongs to the phycobilisome linker protein family.
  
     0.437
AFZ47357.1
Phosphopantetheine-binding protein; PFAM: Phosphopantetheine attachment site; InterPro IPR006163:IPR009081:IPR006162; KEGG: mar:MAE_22960 hypothetical protein; PFAM: phosphopantetheine-binding; SPTR: Putative uncharacterized protein.
  
     0.401
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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