STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ47454.1KEGG: mar:MAE_58760 hypothetical protein; SPTR: Putative uncharacterized protein. (376 aa)    
Predicted Functional Partners:
AFZ46873.1
Protoporphyrin IX magnesium-chelatase; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
  
 
 0.728
AFZ47248.1
Protoporphyrin IX magnesium-chelatase; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
  
 
 0.728
AFZ47453.1
Hypothetical protein; PFAM: Tubulin/FtsZ family, GTPase domain; InterPro IPR022272; KEGG: ava:Ava_1848 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.551
AFZ47455.1
PFAM: Amidohydrolase family; COGs: COG0402 Cytosine deaminase and related metal-dependent hydrolase; InterPro IPR013108; KEGG: cyc:PCC7424_0235 cytosine deaminase; PFAM: Amidohydrolase 3; SPTR: Amidohydrolase 3.
       0.533
AFZ47451.1
Hypothetical protein; PFAM: OmpA family; KEGG: cyh:Cyan8802_4290 hypothetical protein; SPTR: Putative uncharacterized protein.
     
 0.405
AFZ47452.1
KEGG: ter:Tery_1706 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.405
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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