STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ47570.1PFAM: CHRD domain; InterPro IPR010895; KEGG: syf:Synpcc7942_2003 hypothetical protein; PFAM: CHRD domain containing protein; SMART: CHRD domain containing protein; SPTR: Putative uncharacterized protein. (220 aa)    
Predicted Functional Partners:
AFZ47658.1
PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Localisation of periplasmic protein complexes; TIGRFAM: TonB-dependent heme/hemoglobin receptor family protein; TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531:IPR010949:IPR011276; KEGG: ana:alr2153 outer membrane heme receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: Outer membrane heme receptor; TIGRFAM: TonB-dependent hemoglobin/transferrin/lactoferrin family receptor; [...]
    
 
 0.700
AFZ46264.1
AMP-dependent synthetase and ligase; PFAM: AMP-binding enzyme; COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR020845:IPR000873; KEGG: cyc:PCC7424_1874 beta-ketoacyl synthase; PFAM: AMP-dependent synthetase and ligase; SPTR: Beta-ketoacyl synthase.
 
   
 0.576
AFZ46223.1
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); PFAM: EAL domain; GGDEF domain; FHA domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; COGs: COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain; InterProIPR000253:IPR000014:IPR000160:IPR001633:IPR 013767; KEGG: cyt:cce_2788 hypothetical protein; PFAM: EAL domain protein; Forkhead-associated protein; PAS fold domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; Forkhead-associated protein; PAS domain c [...]
  
  
 0.554
AFZ46265.1
Beta-ketoacyl synthase; PFAM: Acyl transferase domain; Phosphopantetheine attachment site; KR domain; Beta-ketoacyl synthase, N-terminal domain; AMP-binding enzyme; Sulfotransferase domain; Beta-ketoacyl synthase, C-terminal domain; COGs: COG3321 Polyketide synthase modules and related protein; InterProIPR000639:IPR009081:IPR006162:IPR018201:IPR 000873:IPR006163:IPR014030:IPR014031:IPR014043:IPR013968:I PR000863:IPR000073; KEGG: cyc:PCC7424_1874 beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase; phosphopantetheine-binding; AMP-dependent synthetase and ligase; Acyl transferase; KR do [...]
     
 0.484
AFZ46629.1
Bacteriocin-processing peptidase; PFAM: ABC transporter transmembrane region; ABC transporter; Peptidase C39 family; Cyclic nucleotide-binding domain; TIGRFAM: ABC-type bacteriocin transporter; type I secretion system ABC transporter, HlyB family; COGs: COG2274 ABC-type bacteriocin/lantibiotic exporter contain an N-terminal double-glycine peptidase domain; InterProIPR000595:IPR003439:IPR017940:IPR005074:IPR 017871:IPR001140:IPR003593; KEGG: cyt:cce_2670 ABC transporter ATP-binding protein; PFAM: ABC transporter related; peptidase C39 bacteriocin processing; cyclic nucleotide-binding; A [...]
 
  
 0.471
AFZ47571.1
Zeta-carotene desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'.
       0.468
AFZ46309.1
Diguanylate cyclase with PAS/PAC sensor; PFAM: GGDEF domain; FHA domain; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; COGs: COG2199 FOG: GGDEF domain; InterPro IPR000253:IPR000160:IPR000014; KEGG: cyc:PCC7424_3126 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); PFAM: Forkhead-associated protein; GGDEF domain containing protein; SMART: GGDEF domain containing protein; Forkhead-associated protein; SPTR: Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S); TIGRFAM: diguanylate cyclase; PAS sensor protein.
  
  
 0.451
AFZ46283.1
Cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporters; PFAM: Peptidase C39 family; ABC transporter; ABC transporter transmembrane region; Cyclic nucleotide-binding domain; TIGRFAM: type I secretion system ABC transporter, HlyB family; COGs: COG2274 ABC-type bacteriocin/lantibiotic exporter contain an N-terminal double-glycine peptidase domain; InterProIPR003593:IPR000595:IPR003439:IPR017940:IPR 005074:IPR017871:IPR001140:IPR010132; KEGG: cyt:cce_2355 toxin secretion ABC transporter ATP-binding protein; PFAM: ABC transporter related; ABC transporter transmembrane region; cyc [...]
  
  
 0.449
AFZ47051.1
CRISPR-associated protein, Cmr2 family; PFAM: CRISPR-associated protein; InterPro IPR000160; KEGG: cyn:Cyan7425_5328 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.445
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.