STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ47574.1PFAM: Protein of unknown function (DUF2993); KEGG: cyc:PCC7424_0188 hypothetical protein; SPTR: Putative uncharacterized protein. (257 aa)    
Predicted Functional Partners:
AFZ48091.1
KEGG: mar:MAE_21450 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.774
AFZ47376.1
Peptidase S8 and S53 subtilisin kexin sedolisin; PFAM: Subtilase family; InterPro IPR000209; KEGG: mar:MAE_17200 hypothetical protein; PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; SPTR: Putative uncharacterized protein.
  
     0.744
AFZ48810.1
PFAM: Bacterial pre-peptidase C-terminal domain; InterPro IPR007280; KEGG: cyt:cce_1646 hypothetical protein; PFAM: peptidase domain protein; SPTR: Putative uncharacterized protein; manually curated.
  
     0.726
AFZ48292.1
PFAM: Peptidase family M48; InterPro IPR001915; KEGG: cyh:Cyan8802_2623 peptidase M56 BlaR1; PFAM: peptidase M48 Ste24p; SPTR: Peptidase M56 BlaR1.
  
     0.717
AFZ46897.1
PFAM: Protein of unknown function (DUF1239); InterPro IPR010664; KEGG: cyc:PCC7424_0097 protein of unknown function DUF1239; PFAM: protein of unknown function DUF1239; SPTR: Putative uncharacterized protein.
  
     0.692
AFZ47573.1
Lipoprotein LpqB, GerMN domain protein; PFAM: Sporulation and spore germination; COGs: COG5401 Spore germination protein; InterPro IPR019606; KEGG: cyh:Cyan8802_2141 putative spore germination protein; PFAM: Lipoprotein LpqB, GerMN domain; SPTR: Putative spore germination protein.
       0.677
AFZ47158.1
KEGG: cyc:PCC7424_4397 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.657
AFZ48798.1
KEGG: cyc:PCC7424_5342 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.642
AFZ46679.1
PFAM: Tic22-like family; InterPro IPR007378; KEGG: syn:slr0924 hypothetical protein; PFAM: Tic22 family proein; SPTR: Slr0924 protein.
  
     0.635
AFZ47547.1
KEGG: cyt:cce_0904 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.615
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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