STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ47636.1KEGG: syp:SYNPCC7002_A0922 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated. (489 aa)    
Predicted Functional Partners:
AFZ47755.1
Hypothetical protein; PFAM: Domain of unknown function (DUF697); COGs: COG3597 Uncharacterized protein/domain associated with GTPase; KEGG: mar:MAE_32050 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.607
AFZ46824.1
KEGG: cyc:PCC7424_3084 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.530
AFZ47003.1
PFAM: GTPase of unknown function; TIGRFAM: small GTP-binding protein domain; COGs: COG3596 GTPase; InterPro IPR002917; KEGG: ava:Ava_2089 small GTP-binding protein domain-containing protein; PFAM: GTP-binding protein HSR1-related; SPTR: Small GTP-binding protein domain.
  
     0.529
glgA-2
Glycogen/starch synthase, ADP-glucose type; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
 
    0.503
AFZ48176.1
CsbD family protein; PFAM: CsbD-like; InterPro IPR008462; KEGG: mar:MAE_29190 CsbD-like protein; PFAM: CsbD family protein; SPTR: CsbD-like superfamily; Belongs to the UPF0337 (CsbD) family.
  
     0.402
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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