STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ47658.1PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Localisation of periplasmic protein complexes; TIGRFAM: TonB-dependent heme/hemoglobin receptor family protein; TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531:IPR010949:IPR011276; KEGG: ana:alr2153 outer membrane heme receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: Outer membrane heme receptor; TIGRFAM: TonB-dependent hemoglobin/transferrin/lactoferrin family receptor; [...] (876 aa)    
Predicted Functional Partners:
AFZ47657.1
PFAM: Periplasmic binding protein; COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component; InterPro IPR002491; KEGG: ava:Ava_1764 periplasmic binding protein; PFAM: periplasmic binding protein; SPTR: Periplasmic binding protein.
 
  
 0.966
AFZ47094.1
TonB family protein; PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; InterPro IPR006260; KEGG: cyc:PCC7424_2390 TonB family protein; SPTR: TonB family protein; TIGRFAM: TonB family protein.
 
 
 0.942
AFZ47341.1
TonB family protein; PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; InterPro IPR006260; KEGG: cyc:PCC7424_0339 TonB family protein; SPTR: TonB family protein; TIGRFAM: TonB family protein.
  
 
 0.933
AFZ47659.1
PFAM: ABC transporter; COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components; InterPro IPR003439:IPR017871:IPR003593; KEGG: ava:Ava_4898 ABC transporter-like; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter-like.
 
  
 0.844
AFZ47660.1
Transport system permease protein; PFAM: FecCD transport family; COGs: COG0609 ABC-type Fe3+-siderophore transport system permease component; InterPro IPR000522; KEGG: amr:AM1_3414 iron compound ABC transporter, permease protein, putative; PFAM: transport system permease protein; SPTR: Iron compound ABC transporter, permease protein, putative; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.827
AFZ47735.1
PFAM: Multicopper oxidase; FG-GAP repeat; COGs: COG2132 Putative multicopper oxidase; InterPro IPR011707:IPR011706:IPR013517:IPR002355; KEGG: ter:Tery_5023 multicopper oxidase, type 2; PFAM: multicopper oxidase type 3; multicopper oxidase type 2; FG-GAP repeat protein; SPTR: Multicopper oxidase type 3.
    
 
 0.818
AFZ47737.1
PFAM: Cupin domain; InterPro IPR013096:IPR003368:IPR006626; KEGG: mar:MAE_01000 hypothetical protein; PFAM: Cupin 2 conserved barrel domain protein; Polymorphic membrane protein Chlamydia; SPTR: Putative uncharacterized protein.
    
 
 0.749
AFZ48399.1
Hypothetical protein; KEGG: mar:MAE_16640 alkaline phosphatase; SPTR: Alkaline phosphatase.
    
 
 0.749
AFZ47570.1
PFAM: CHRD domain; InterPro IPR010895; KEGG: syf:Synpcc7942_2003 hypothetical protein; PFAM: CHRD domain containing protein; SMART: CHRD domain containing protein; SPTR: Putative uncharacterized protein.
    
 
 0.700
AFZ46989.1
COGs: COG1112 Superfamily I DNA and RNA helicase and helicase subunits; KEGG: pna:Pnap_4258 superfamily I DNA/RNA helicase; SPTR: Putative uncharacterized protein.
  
     0.609
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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