STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ47716.1Hypothetical protein; PFAM: Toxin with endonuclease activity YhaV; KEGG: amr:AM1_B0347 hypothetical protein; SPTR: Putative uncharacterized protein. (151 aa)    
Predicted Functional Partners:
AFZ47715.1
KEGG: mar:MAE_38900 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.793
AFZ47714.1
Cl- channel voltage-gated family protein; PFAM: CBS domain; Voltage gated chloride channel; Universal stress protein family; COGs: COG0038 Chloride channel protein EriC; InterPro IPR001807:IPR000644:IPR006016; KEGG: cyt:cce_0078 chloride channel protein; PFAM: Cl- channel voltage-gated family protein; CBS domain containing protein; UspA domain-containing protein; SMART: CBS domain containing protein; SPTR: Chloride channel protein.
       0.628
AFZ46011.1
PFAM: GtrA-like protein; InterPro IPR007267; KEGG: lsl:LSL_1271 cell wall teichoic acid glycosylation protein GtcA; PFAM: GtrA family protein; SPTR: Genome sequencing data, contig C200.
  
     0.590
AFZ46247.1
PFAM: Protein of unknown function (DUF3038); KEGG: cyc:PCC7424_4010 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.562
AFZ47910.1
Hypothetical protein; PFAM: PIN domain; KEGG: cyn:Cyan7425_4609 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.555
AFZ47718.1
KEGG: mar:MAE_34900 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.550
AFZ47674.1
PFAM: Domain of Unknown Function (DUF748); Family of unknown function (DUF490); InterPro IPR007452; KEGG: cyh:Cyan8802_4502 protein of unknown function DUF490; PFAM: protein of unknown function DUF490; SPTR: Putative uncharacterized protein.
  
     0.542
AFZ47780.1
Tetratricopeptide TPR_1 repeat-containing protein; InterPro IPR001440; KEGG: cyn:Cyan7425_5127 superfamily I DNA and RNA helicase-like protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Superfamily I DNA and RNA helicase-like protein.
  
     0.528
AFZ46235.1
KEGG: amr:AM1_3911 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.508
AFZ46708.1
PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GAF domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG3920 Signal transduction histidine kinase; InterProIPR016132:IPR005467:IPR000014:IPR000700:IPR 000644:IPR003018:IPR013655:IPR013767:IPR011495:IPR003594:I PR001610; KEGG: cyb:CYB_1653 sensory box histidine kinase; PFAM: histidine kinase dimerisation/phosphoacceptor; GAF domain protein; CBS domain containing protein; PAS fold-3 domain protein; PAS fold domain protein; ATP-binding region ATPase domain protein; SMART: GAF domain protein; CBS domain cont [...]
  
     0.508
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.