STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ47731.1Isoamylase; PFAM: Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Alpha amylase, catalytic domain; TIGRFAM: glycogen debranching enzyme GlgX; COGs: COG1523 Type II secretory pathway pullulanase PulA and related glycosidase; InterPro IPR004193:IPR006047:IPR011837:IPR006589; KEGG: ter:Tery_5016 glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; SPTR: Glycogen debranching enzyme GlgX; TIGRFAM: glycogen debranching enzyme GlgX; Belongs to the glycosyl hydrolase 13 family. (706 aa)    
Predicted Functional Partners:
glgB
Glycogen branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
 
 
0.979
AFZ48799.1
Glycogen/starch/alpha-glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 
 0.966
AFZ46797.1
PFAM: 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase; COGs: COG1640 4-alpha-glucanotransferase; InterPro IPR003385; KEGG: cyt:cce_1474 4-alpha-glucanotransferase; PFAM: glycoside hydrolase family 77; PRIAM: 4-alpha-glucanotransferase; SPTR: 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase.
 
 0.957
AFZ48467.1
Pullulanase; PFAM: Alpha amylase, catalytic domain; COGs: COG0366 Glycosidase; InterPro IPR006589:IPR006047; KEGG: npu:Npun_R6073 alpha amylase, catalytic region; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; SPTR: Alpha amylase, catalytic region; isoamylase.
 
 0.955
AFZ46133.1
PFAM: Alpha amylase, catalytic domain; Domain of unknown function (DUF1939); COGs: COG0366 Glycosidase; InterPro IPR013776:IPR006589:IPR006047; KEGG: amr:AM1_2293 cytoplasmic alpha-amylase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; SPTR: Alpha-amylase.
  
 
 0.946
AFZ47130.1
(1->4)-alpha-D-glucan branching enzyme; PFAM: Domain of unknown function (DUF1957); Glycosyl hydrolase family 57; COGs: COG1543 conserved hypothetical protein; InterPro IPR004300:IPR015293; KEGG: cyc:PCC7424_5064 hypothetical protein; PFAM: Domain of unknown function DUF1957; glycoside hydrolase family 57; SPTR: Putative uncharacterized protein.
     
 0.900
glgC
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
 
  
 0.804
glgA-2
Glycogen/starch synthase, ADP-glucose type; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
 
  
 0.791
glgA
Glycogen/starch synthase, ADP-glucose type; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
  
 0.778
AFZ47730.1
PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; InterPro IPR002645:IPR003658; KEGG: ter:Tery_5015 anti-sigma-factor antagonist; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; SPTR: Anti-sigma factor antagonist; TIGRFAM: anti-anti-sigma factor.
 
     0.750
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.