STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ47739.1PFAM: Carboxymuconolactone decarboxylase family; COGs: COG0599 gamma-carboxymuconolactone decarboxylase subunit; InterPro IPR003779; KEGG: ter:Tery_5022 carboxymuconolactone decarboxylase; PFAM: Carboxymuconolactone decarboxylase; SPTR: Carboxymuconolactone decarboxylase. (118 aa)    
Predicted Functional Partners:
AFZ47738.1
Protein of unknown function DUF1486; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; InterPro IPR004360:IPR009959; KEGG: ter:Tery_5021 ethyl tert-butyl ether degradation EthD; PFAM: protein of unknown function DUF1486; Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Ethyl tert-butyl ether degradation EthD.
 
     0.941
AFZ47740.1
Hypothetical protein; KEGG: ter:Tery_5021 ethyl tert-butyl ether degradation EthD; SPTR: Ethyl tert-butyl ether degradation EthD.
 
     0.912
AFZ47730.1
PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; InterPro IPR002645:IPR003658; KEGG: ter:Tery_5015 anti-sigma-factor antagonist; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; SPTR: Anti-sigma factor antagonist; TIGRFAM: anti-anti-sigma factor.
  
    0.789
AFZ47734.1
ThiJ/PfpI domain-containing protein; PFAM: DJ-1/PfpI family; COGs: COG0693 Putative intracellular protease/amidase; InterPro IPR002818; KEGG: syn:slr1854 hypothetical protein; PFAM: ThiJ/PfpI domain-containing protein; SPTR: Slr1854 protein.
 
    0.772
AFZ47733.1
Hypothetical protein; PFAM: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); COGs: COG2942 N-acyl-D-glucosamine 2-epimerase; KEGG: syn:slr1855 hypothetical protein; SPTR: Slr1855 protein.
  
     0.771
AFZ47732.1
Anti-sigma-factor antagonist; PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; COGs: COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); InterPro IPR002645:IPR003658; KEGG: ter:Tery_5017 anti-sigma-factor antagonist; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; SPTR: Anti-sigma factor antagonist; TIGRFAM: anti-anti-sigma factor.
  
    0.678
AFZ46886.1
KEGG: syn:slr1421 hypothetical protein; SPTR: Slr1421 protein.
  
     0.640
AFZ47723.1
PFAM: Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; Stage II sporulation protein E (SpoIIE); COGs: COG2208 Serine phosphatase RsbU regulator of sigma subunit; InterPro IPR003661:IPR001789:IPR010822:IPR001932; KEGG: syn:slr1983 regulatory components of sensory transduction system; PFAM: Stage II sporulation protein E; response regulator receiver; histidine kinase A domain protein; SMART: protein phosphatase 2C domain protein; response regulator receiver; histidine kinase A domain protein; SPTR: Regulatory components of sensory transduction system.
  
    0.638
AFZ47737.1
PFAM: Cupin domain; InterPro IPR013096:IPR003368:IPR006626; KEGG: mar:MAE_01000 hypothetical protein; PFAM: Cupin 2 conserved barrel domain protein; Polymorphic membrane protein Chlamydia; SPTR: Putative uncharacterized protein.
  
    0.637
AFZ46264.1
AMP-dependent synthetase and ligase; PFAM: AMP-binding enzyme; COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR020845:IPR000873; KEGG: cyc:PCC7424_1874 beta-ketoacyl synthase; PFAM: AMP-dependent synthetase and ligase; SPTR: Beta-ketoacyl synthase.
  
  
 0.628
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.