Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AFZ46775.1 | AFZ47151.1 | Cyast_0803 | Cyast_1185 | Ycf48-like protein; Unknown. The ortholog in A.thaliana is involved in photosystem II (PSII) assembly, but knockout of the corresponding gene in Synechoccus PCC 7002 has no effect on PSII activity. | PFAM: NnrU protein; COGs: COG4094 membrane protein; KEGG: cyt:cce_2781 putative NnrU protein; SPTR: NnrU. | 0.719 |
| AFZ46775.1 | AFZ47571.1 | Cyast_0803 | Cyast_1610 | Ycf48-like protein; Unknown. The ortholog in A.thaliana is involved in photosystem II (PSII) assembly, but knockout of the corresponding gene in Synechoccus PCC 7002 has no effect on PSII activity. | Zeta-carotene desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'. | 0.658 |
| AFZ46775.1 | AFZ47759.1 | Cyast_0803 | Cyast_1803 | Ycf48-like protein; Unknown. The ortholog in A.thaliana is involved in photosystem II (PSII) assembly, but knockout of the corresponding gene in Synechoccus PCC 7002 has no effect on PSII activity. | PFAM: Manganese-stabilising protein / photosystem II polypeptide; InterPro IPR002628; KEGG: cyt:cce_2572 photosystem II manganese-stabilizing polypeptide, 33 kD extrinsic protein; PFAM: photosystem II manganese-stabilizing protein PsbO; SPTR: Photosystem II manganese-stabilizing polypeptide. | 0.807 |
| AFZ46775.1 | AFZ47820.1 | Cyast_0803 | Cyast_1865 | Ycf48-like protein; Unknown. The ortholog in A.thaliana is involved in photosystem II (PSII) assembly, but knockout of the corresponding gene in Synechoccus PCC 7002 has no effect on PSII activity. | Zeta-carotene desaturase; PFAM: Flavin containing amine oxidoreductase; TIGRFAM: phytoene desaturase; COGs: COG3349 conserved hypothetical protein; InterPro IPR014102:IPR002937:IPR001613; KEGG: amr:AM1_4826 phytoene desaturase/phytoene desaturase; PFAM: amine oxidase; PRIAM: Carotene 7,8-desaturase; SPTR: Phytoene desaturase/phytoene desaturase; TIGRFAM: phytoene desaturase; three-step phytoene desaturase. | 0.734 |
| AFZ46775.1 | AFZ47835.1 | Cyast_0803 | Cyast_1880 | Ycf48-like protein; Unknown. The ortholog in A.thaliana is involved in photosystem II (PSII) assembly, but knockout of the corresponding gene in Synechoccus PCC 7002 has no effect on PSII activity. | PFAM: Protein of unknown function (DUF1350); InterPro IPR010765; KEGG: cyp:PCC8801_3548 protein of unknown function DUF1350; PFAM: protein of unknown function DUF1350; SPTR: Putative uncharacterized protein. | 0.753 |
| AFZ46775.1 | AFZ47879.1 | Cyast_0803 | Cyast_1926 | Ycf48-like protein; Unknown. The ortholog in A.thaliana is involved in photosystem II (PSII) assembly, but knockout of the corresponding gene in Synechoccus PCC 7002 has no effect on PSII activity. | KEGG: cyc:PCC7424_4510 hypothetical protein; SPTR: Putative uncharacterized protein. | 0.751 |
| AFZ46775.1 | AFZ48234.1 | Cyast_0803 | Cyast_2286 | Ycf48-like protein; Unknown. The ortholog in A.thaliana is involved in photosystem II (PSII) assembly, but knockout of the corresponding gene in Synechoccus PCC 7002 has no effect on PSII activity. | KEGG: syp:SYNPCC7002_A1387 hypothetical protein; SPTR: Conserved hypothetical membrane protein. | 0.749 |
| AFZ46775.1 | psb27 | Cyast_0803 | Cyast_0564 | Ycf48-like protein; Unknown. The ortholog in A.thaliana is involved in photosystem II (PSII) assembly, but knockout of the corresponding gene in Synechoccus PCC 7002 has no effect on PSII activity. | Photosystem II protein Psb27; Plays a role in the repair and/or biogenesis of the calcium- manganese-oxide cluster on the lumenal face of the thylakoid membrane. Its presence in a photosystem II (PSII) preparation prevents binding of some small extrinsic subunits and thus assembly of calcium-manganese- oxide cluster. | 0.764 |
| AFZ46775.1 | psb28 | Cyast_0803 | Cyast_0805 | Ycf48-like protein; Unknown. The ortholog in A.thaliana is involved in photosystem II (PSII) assembly, but knockout of the corresponding gene in Synechoccus PCC 7002 has no effect on PSII activity. | PFAM: Psb28 protein; TIGRFAM: photosystem II reaction center protein Psb28; InterPro IPR005610; KEGG: cyt:cce_1599 photosystem II reaction center protein Psb28; PFAM: photosystem II protein PsbW class I; SPTR: Photosystem II reaction center Psb28 protein; TIGRFAM: photosystem II reaction center protein Psb28; Belongs to the Psb28 family. | 0.803 |
| AFZ47151.1 | AFZ46775.1 | Cyast_1185 | Cyast_0803 | PFAM: NnrU protein; COGs: COG4094 membrane protein; KEGG: cyt:cce_2781 putative NnrU protein; SPTR: NnrU. | Ycf48-like protein; Unknown. The ortholog in A.thaliana is involved in photosystem II (PSII) assembly, but knockout of the corresponding gene in Synechoccus PCC 7002 has no effect on PSII activity. | 0.719 |
| AFZ47151.1 | AFZ47571.1 | Cyast_1185 | Cyast_1610 | PFAM: NnrU protein; COGs: COG4094 membrane protein; KEGG: cyt:cce_2781 putative NnrU protein; SPTR: NnrU. | Zeta-carotene desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'. | 0.880 |
| AFZ47151.1 | AFZ47759.1 | Cyast_1185 | Cyast_1803 | PFAM: NnrU protein; COGs: COG4094 membrane protein; KEGG: cyt:cce_2781 putative NnrU protein; SPTR: NnrU. | PFAM: Manganese-stabilising protein / photosystem II polypeptide; InterPro IPR002628; KEGG: cyt:cce_2572 photosystem II manganese-stabilizing polypeptide, 33 kD extrinsic protein; PFAM: photosystem II manganese-stabilizing protein PsbO; SPTR: Photosystem II manganese-stabilizing polypeptide. | 0.773 |
| AFZ47151.1 | AFZ47820.1 | Cyast_1185 | Cyast_1865 | PFAM: NnrU protein; COGs: COG4094 membrane protein; KEGG: cyt:cce_2781 putative NnrU protein; SPTR: NnrU. | Zeta-carotene desaturase; PFAM: Flavin containing amine oxidoreductase; TIGRFAM: phytoene desaturase; COGs: COG3349 conserved hypothetical protein; InterPro IPR014102:IPR002937:IPR001613; KEGG: amr:AM1_4826 phytoene desaturase/phytoene desaturase; PFAM: amine oxidase; PRIAM: Carotene 7,8-desaturase; SPTR: Phytoene desaturase/phytoene desaturase; TIGRFAM: phytoene desaturase; three-step phytoene desaturase. | 0.879 |
| AFZ47151.1 | AFZ47835.1 | Cyast_1185 | Cyast_1880 | PFAM: NnrU protein; COGs: COG4094 membrane protein; KEGG: cyt:cce_2781 putative NnrU protein; SPTR: NnrU. | PFAM: Protein of unknown function (DUF1350); InterPro IPR010765; KEGG: cyp:PCC8801_3548 protein of unknown function DUF1350; PFAM: protein of unknown function DUF1350; SPTR: Putative uncharacterized protein. | 0.771 |
| AFZ47151.1 | AFZ47879.1 | Cyast_1185 | Cyast_1926 | PFAM: NnrU protein; COGs: COG4094 membrane protein; KEGG: cyt:cce_2781 putative NnrU protein; SPTR: NnrU. | KEGG: cyc:PCC7424_4510 hypothetical protein; SPTR: Putative uncharacterized protein. | 0.738 |
| AFZ47151.1 | AFZ48234.1 | Cyast_1185 | Cyast_2286 | PFAM: NnrU protein; COGs: COG4094 membrane protein; KEGG: cyt:cce_2781 putative NnrU protein; SPTR: NnrU. | KEGG: syp:SYNPCC7002_A1387 hypothetical protein; SPTR: Conserved hypothetical membrane protein. | 0.772 |
| AFZ47151.1 | psb27 | Cyast_1185 | Cyast_0564 | PFAM: NnrU protein; COGs: COG4094 membrane protein; KEGG: cyt:cce_2781 putative NnrU protein; SPTR: NnrU. | Photosystem II protein Psb27; Plays a role in the repair and/or biogenesis of the calcium- manganese-oxide cluster on the lumenal face of the thylakoid membrane. Its presence in a photosystem II (PSII) preparation prevents binding of some small extrinsic subunits and thus assembly of calcium-manganese- oxide cluster. | 0.770 |
| AFZ47151.1 | psb28 | Cyast_1185 | Cyast_0805 | PFAM: NnrU protein; COGs: COG4094 membrane protein; KEGG: cyt:cce_2781 putative NnrU protein; SPTR: NnrU. | PFAM: Psb28 protein; TIGRFAM: photosystem II reaction center protein Psb28; InterPro IPR005610; KEGG: cyt:cce_1599 photosystem II reaction center protein Psb28; PFAM: photosystem II protein PsbW class I; SPTR: Photosystem II reaction center Psb28 protein; TIGRFAM: photosystem II reaction center protein Psb28; Belongs to the Psb28 family. | 0.755 |
| AFZ47571.1 | AFZ46775.1 | Cyast_1610 | Cyast_0803 | Zeta-carotene desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'. | Ycf48-like protein; Unknown. The ortholog in A.thaliana is involved in photosystem II (PSII) assembly, but knockout of the corresponding gene in Synechoccus PCC 7002 has no effect on PSII activity. | 0.658 |
| AFZ47571.1 | AFZ47151.1 | Cyast_1610 | Cyast_1185 | Zeta-carotene desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'. | PFAM: NnrU protein; COGs: COG4094 membrane protein; KEGG: cyt:cce_2781 putative NnrU protein; SPTR: NnrU. | 0.880 |
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