STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ47827.1KEGG: ava:Ava_3212 hypothetical protein; SPTR: Putative uncharacterized protein. (300 aa)    
Predicted Functional Partners:
AFZ47010.1
KEGG: cyt:cce_1644 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.770
AFZ48644.1
Glycosyl transferase family 39; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase; COGs: COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family; KEGG: cyc:PCC7424_1445 glycosyl transferase family 39; SPTR: Glycosyl transferase family 39.
  
     0.766
AFZ47513.1
InterPro IPR001440:IPR019734:IPR013026; KEGG: cyc:PCC7424_3039 tetratricopeptide domain protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: Tetratricopeptide TPR_2 repeat protein.
  
     0.748
AFZ46976.1
KEGG: cyt:cce_2996 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.744
AFZ47793.1
KEGG: cyc:PCC7424_0174 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.742
AFZ47689.1
Hypothetical protein; PFAM: Domain of unknown function (DUF1868); KEGG: cyh:Cyan8802_4219 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.733
AFZ48375.1
KEGG: cyc:PCC7424_1119 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated.
  
     0.731
AFZ46008.1
PFAM: Protein of unknown function (DUF1049); KEGG: cyh:Cyan8802_1369 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.723
AFZ48619.1
KEGG: ter:Tery_0603 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.723
AFZ46041.1
Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
  
 
 0.711
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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