STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ47837.1KEGG: cyc:PCC7424_3792 hypothetical protein; SPTR: Putative uncharacterized protein. (264 aa)    
Predicted Functional Partners:
AFZ46757.1
InterPro IPR012899; KEGG: syn:sll0858 hypothetical protein; PFAM: protein of unknown function Spy-related; SPTR: Sll0858 protein.
  
     0.722
AFZ48182.1
PFAM: Oxygen evolving enhancer protein 3 (PsbQ); TIGRFAM: photosystem II protein PsbQ; InterPro IPR017487; KEGG: mar:MAE_50080 photosystem II extrinsic protein; SPTR: Photosystem II extrinsic protein; TIGRFAM: photosystem II protein PsbQ.
  
     0.649
AFZ47787.1
PFAM: Protein of unknown function (DUF3352); KEGG: cyc:PCC7424_1390 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.629
AFZ46345.1
PFAM: Alpha/beta hydrolase of unknown function (DUF1400); InterPro IPR010802; KEGG: cyt:cce_1419 hypothetical protein; PFAM: protein of unknown function DUF1400; SPTR: Putative uncharacterized protein.
  
     0.590
AFZ47863.1
KEGG: cyh:Cyan8802_4393 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.523
AFZ48668.1
KEGG: cyp:PCC8801_3907 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.517
ndhA
NADH dehydrogenase subunit H; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient.
       0.511
AFZ46906.1
Hypothetical protein; KEGG: npu:Npun_F4027 S-layer domain-containing protein; SPTR: S-layer domain protein.
  
     0.507
AFZ46282.1
PFAM: HlyD family secretion protein; InterPro IPR003997:IPR006143; KEGG: cyt:cce_3059 HlyD family secretion protein; PFAM: secretion protein HlyD family protein; SPTR: HlyD-family secretion protein.
  
     0.488
AFZ48275.1
PFAM: Protein of unknown function (DUF3134); KEGG: cyt:cce_0911 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.485
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.