STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ47855.1PFAM: Glycosyl transferase family 2; InterPro IPR001173; KEGG: mar:MAE_06070 glycosyl transferase family protein; PFAM: glycosyl transferase family 2; SPTR: Similar to tr|Q116L6|Q116L6_TRIEI Glycosyl transferase. (235 aa)    
Predicted Functional Partners:
AFZ47956.1
Protein of unknown function DUF2064; PFAM: Uncharacterized protein conserved in bacteria (DUF2064); COGs: COG3222 conserved hypothetical protein; InterPro IPR018641; KEGG: cyh:Cyan8802_2226 hypothetical protein; PFAM: Protein of unknown function DUF2064; SPTR: Putative uncharacterized protein.
     0.978
AFZ48314.1
PFAM: Radical SAM superfamily; Protein of unknown function (DUF3641); TIGRFAM: radical SAM/Cys-rich domain protein; COGs: COG0535 Fe-S oxidoreductase; InterPro IPR007197; KEGG: ana:alr3097 hypothetical protein; PFAM: Radical SAM domain protein; SPTR: Alr3097 protein.
 
     0.772
AFZ48301.1
PFAM: SNARE associated Golgi protein; COGs: COG0398 conserved hypothetical protein; InterPro IPR015414; KEGG: ana:alr2207 hypothetical protein; PFAM: SNARE associated Golgi protein; SPTR: Alr2207 protein.
  
     0.656
AFZ48302.1
PFAM: SNARE associated Golgi protein; COGs: COG0398 conserved hypothetical protein; InterPro IPR015414; KEGG: ava:Ava_2775 hypothetical protein; PFAM: SNARE associated Golgi protein; SPTR: Putative uncharacterized protein.
  
     0.636
AFZ47856.1
Agmatinase; PFAM: Arginase family; TIGRFAM: agmatinase; COGs: COG0010 Arginase/agmatinase/formimionoglutamate hydrolase arginase family; InterPro IPR005925:IPR006035:IPR020855; KEGG: syp:SYNPCC7002_A1109 agmatinase, putative; PFAM: Arginase/agmatinase/formiminoglutamase; SPTR: Agmatinase, putative; TIGRFAM: agmatinase; Belongs to the arginase family.
       0.603
AFZ46264.1
AMP-dependent synthetase and ligase; PFAM: AMP-binding enzyme; COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR020845:IPR000873; KEGG: cyc:PCC7424_1874 beta-ketoacyl synthase; PFAM: AMP-dependent synthetase and ligase; SPTR: Beta-ketoacyl synthase.
  
 
 0.590
AFZ46265.1
Beta-ketoacyl synthase; PFAM: Acyl transferase domain; Phosphopantetheine attachment site; KR domain; Beta-ketoacyl synthase, N-terminal domain; AMP-binding enzyme; Sulfotransferase domain; Beta-ketoacyl synthase, C-terminal domain; COGs: COG3321 Polyketide synthase modules and related protein; InterProIPR000639:IPR009081:IPR006162:IPR018201:IPR 000873:IPR006163:IPR014030:IPR014031:IPR014043:IPR013968:I PR000863:IPR000073; KEGG: cyc:PCC7424_1874 beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase; phosphopantetheine-binding; AMP-dependent synthetase and ligase; Acyl transferase; KR do [...]
  
 
 0.590
AFZ48299.1
PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterProIPR018062:IPR012999:IPR013027:IPR004099:IPR 000815; KEGG: mar:MAE_22610 mercuric reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SPTR: Mercuric reductase.
  
     0.574
AFZ48315.1
Methyltransferase type 11; PFAM: Methyltransferase domain; COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: ava:Ava_3797 hypothetical protein; PFAM: Methyltransferase type 11; SPTR: Methyltransferase domain family.
  
    0.506
asnS
PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: asparaginyl-tRNA synthetase; COGs: COG0017 Aspartyl/asparaginyl-tRNA synthetase; InterProIPR004522:IPR004365:IPR004364:IPR006195:IPR 002312; KEGG: cyc:PCC7424_2654 asparaginyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; SPTR: Asparaginyl-tRNA synthetase; TIGRFAM: asparaginyl-tRNA synthetase.
       0.497
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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