STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ47859.1Orange carotenoid-binding protein; PFAM: Nuclear transport factor 2 (NTF2) domain; Orange carotenoid protein, N-terminal; InterPro IPR015233:IPR002075; KEGG: cyc:PCC7424_4467 orange carotenoid protein; PFAM: Orange carotenoid-binding protein; nuclear transport factor 2; SPTR: Water-soluble carotenoid protein. (319 aa)    
Predicted Functional Partners:
AFZ46543.1
KEGG: mar:MAE_18920 hypothetical protein; SPTR: Putative uncharacterized protein.
 
 
 
 0.813
AFZ46018.1
PFAM: Phycobilisome protein; Phycobilisome Linker polypeptide; InterPro IPR001297:IPR012128; KEGG: cyt:cce_0920 phycobilisome core-membrane linker polypeptide; PFAM: Phycobilisome linker polypeptide; Phycocyanin; SPTR: Phycobilisome core-membrane linker polypeptide; Belongs to the phycobilisome linker protein family.
  
 
 
 0.763
AFZ46136.1
CpcD phycobilisome linker domain protein; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer.
  
 
 
 0.743
AFZ46138.1
Allophycocyanin alpha subunit apoprotein; PFAM: Phycobilisome protein; InterPro IPR012128; KEGG: cyc:PCC7424_2634 phycobilisome protein; PFAM: Phycocyanin; SPTR: Phycobilisome protein.
  
 
   0.741
AFZ46823.1
Allophycocyanin alpha-B subunit apoprotein; PFAM: Phycobilisome protein; InterPro IPR012128; KEGG: cyt:cce_3571 allophycocyanin-B; PFAM: Phycocyanin; SPTR: Allophycocyanin-B.
  
 
   0.733
AFZ46566.1
Allophycocyanin, beta subunit; PFAM: Phycobilisome protein; TIGRFAM: allophycocyanin, beta subunit; InterPro IPR012128:IPR006245; KEGG: cyc:PCC7424_2202 allophycocyanin, beta subunit; PFAM: Phycocyanin; SPTR: Allophycocyanin, beta subunit; TIGRFAM: allophycocyanin, beta subunit.
  
 
 
 0.703
AFZ48343.1
KEGG: syp:SYNPCC7002_A0777 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.694
AFZ47328.1
PFAM: Phycobilisome Linker polypeptide; InterPro IPR016470:IPR001297; KEGG: cyh:Cyan8802_1383 phycobilisome linker polypeptide; PFAM: Phycobilisome linker polypeptide; SPTR: Phycobilisome linker polypeptide; Belongs to the phycobilisome linker protein family.
  
 
   0.681
AFZ46137.1
Allophycocyanin, beta subunit; PFAM: Phycobilisome protein; TIGRFAM: allophycocyanin, beta subunit; InterPro IPR012128:IPR006245; KEGG: mar:MAE_10260 allophycocyanin beta subunit; PFAM: Phycocyanin; SPTR: Allophycocyanin beta subunit; TIGRFAM: allophycocyanin, beta subunit.
  
 
 
 0.666
AFZ48668.1
KEGG: cyp:PCC8801_3907 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.644
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.