STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ47879.1KEGG: cyc:PCC7424_4510 hypothetical protein; SPTR: Putative uncharacterized protein. (300 aa)    
Predicted Functional Partners:
AFZ46213.1
PFAM: Protein of unknown function (DUF3110); KEGG: cyc:PCC7424_4978 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.772
pcyA
Phycocyanobilin:ferredoxin oxidoreductase; Catalyzes the four-electron reduction of biliverdin IX-alpha (2-electron reduction at both the A and D rings); the reaction proceeds via an isolatable 2-electron intermediate, 181,182-dihydrobiliverdin. Belongs to the HY2 family.
  
     0.771
AFZ48611.1
PFAM: Domain of unknown function (DUF1825); InterPro IPR014954; KEGG: cyh:Cyan8802_0615 domain of unknown function DUF1825; PFAM: Domain of unknown function DUF1825; SPTR: Putative uncharacterized protein.
  
     0.771
AFZ47759.1
PFAM: Manganese-stabilising protein / photosystem II polypeptide; InterPro IPR002628; KEGG: cyt:cce_2572 photosystem II manganese-stabilizing polypeptide, 33 kD extrinsic protein; PFAM: photosystem II manganese-stabilizing protein PsbO; SPTR: Photosystem II manganese-stabilizing polypeptide.
  
     0.770
AFZ47903.1
PFAM: Protein of unknown function (DUF3067); KEGG: cyh:Cyan8802_4351 hypothetical protein; SPTR: Similar to tr|A3IK48|A3IK48_9CHRO Hypothetical protein.
  
     0.765
AFZ48507.1
Hypothetical protein; PFAM: Chloroplast import component protein (Tic20); KEGG: cyc:PCC7424_4804 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.765
AFZ46535.1
PFAM: Vitamin K epoxide reductase family; COGs: COG4243 membrane protein; InterPro IPR012932; KEGG: syp:SYNPCC7002_A0564 hypothetical protein; PFAM: Vitamin K epoxide reductase; SMART: Vitamin K epoxide reductase; SPTR: Putative uncharacterized protein.
  
     0.763
AFZ46842.1
PFAM: Protein of unknown function (DUF3464); KEGG: cyh:Cyan8802_2334 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.763
psb27
Photosystem II protein Psb27; Plays a role in the repair and/or biogenesis of the calcium- manganese-oxide cluster on the lumenal face of the thylakoid membrane. Its presence in a photosystem II (PSII) preparation prevents binding of some small extrinsic subunits and thus assembly of calcium-manganese- oxide cluster.
  
     0.759
AFZ46760.1
PFAM: Protein of unknown function (DUF2930); KEGG: syn:slr0948 hypothetical protein; SPTR: Slr0948 protein.
  
     0.757
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.