STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ47886.1PFAM: Complex I intermediate-associated protein 30 (CIA30); InterPro IPR013857; KEGG: cyh:Cyan8802_1265 NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30; PFAM: NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30; SPTR: NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30. (327 aa)    
Predicted Functional Partners:
AFZ48289.1
KEGG: cyh:Cyan8802_0626 hypothetical protein; SPTR: Putative uncharacterized protein.
   
 
 0.741
AFZ47571.1
Zeta-carotene desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'.
  
     0.696
AFZ47151.1
PFAM: NnrU protein; COGs: COG4094 membrane protein; KEGG: cyt:cce_2781 putative NnrU protein; SPTR: NnrU.
  
     0.683
AFZ47835.1
PFAM: Protein of unknown function (DUF1350); InterPro IPR010765; KEGG: cyp:PCC8801_3548 protein of unknown function DUF1350; PFAM: protein of unknown function DUF1350; SPTR: Putative uncharacterized protein.
  
     0.650
AFZ47759.1
PFAM: Manganese-stabilising protein / photosystem II polypeptide; InterPro IPR002628; KEGG: cyt:cce_2572 photosystem II manganese-stabilizing polypeptide, 33 kD extrinsic protein; PFAM: photosystem II manganese-stabilizing protein PsbO; SPTR: Photosystem II manganese-stabilizing polypeptide.
  
     0.649
AFZ47781.1
KEGG: cyp:PCC8801_2184 FHA domain-containing protein; SPTR: FHA domain-containing protein.
    
 
 0.630
AFZ48156.1
GUN4 domain protein; PFAM: GUN4-like; InterPro IPR008629; KEGG: cyt:cce_0488 hypothetical protein; PFAM: GUN4 domain protein; SPTR: Putative uncharacterized protein.
  
     0.600
AFZ47820.1
Zeta-carotene desaturase; PFAM: Flavin containing amine oxidoreductase; TIGRFAM: phytoene desaturase; COGs: COG3349 conserved hypothetical protein; InterPro IPR014102:IPR002937:IPR001613; KEGG: amr:AM1_4826 phytoene desaturase/phytoene desaturase; PFAM: amine oxidase; PRIAM: Carotene 7,8-desaturase; SPTR: Phytoene desaturase/phytoene desaturase; TIGRFAM: phytoene desaturase; three-step phytoene desaturase.
  
     0.592
AFZ48234.1
KEGG: syp:SYNPCC7002_A1387 hypothetical protein; SPTR: Conserved hypothetical membrane protein.
  
     0.564
AFZ47885.1
PFAM: PBS lyase HEAT-like repeat; InterPro IPR004155:IPR000357; KEGG: npu:Npun_F5295 heat domain-containing protein; PFAM: PBS lyase HEAT domain protein repeat-containing protein; HEAT domain containing protein; SPTR: HEAT domain containing protein.
 
     0.559
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.