STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ47925.1PFAM: BFD-like [2Fe-2S] binding domain; InterPro IPR007419; KEGG: syn:ssl2250 glycoprotein 64; PFAM: BFD domain protein [2Fe-2S]-binding domain protein; SPTR: Glycoprotein 64. (59 aa)    
Predicted Functional Partners:
AFZ47132.1
Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.
 
 
 0.838
AFZ47133.1
Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.
 
 
 0.834
AFZ47094.1
TonB family protein; PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; InterPro IPR006260; KEGG: cyc:PCC7424_2390 TonB family protein; SPTR: TonB family protein; TIGRFAM: TonB family protein.
  
  
 0.562
AFZ47600.1
PFAM: Protein of unknown function (DUF3750); KEGG: cyh:Cyan8802_1668 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.518
AFZ47780.1
Tetratricopeptide TPR_1 repeat-containing protein; InterPro IPR001440; KEGG: cyn:Cyan7425_5127 superfamily I DNA and RNA helicase-like protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Superfamily I DNA and RNA helicase-like protein.
  
     0.485
AFZ47341.1
TonB family protein; PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; InterPro IPR006260; KEGG: cyc:PCC7424_0339 TonB family protein; SPTR: TonB family protein; TIGRFAM: TonB family protein.
  
  
 0.479
AFZ46011.1
PFAM: GtrA-like protein; InterPro IPR007267; KEGG: lsl:LSL_1271 cell wall teichoic acid glycosylation protein GtcA; PFAM: GtrA family protein; SPTR: Genome sequencing data, contig C200.
  
    0.474
lpxD
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.
       0.470
AFZ48360.1
PFAM: ABC transporter; NMT1/THI5 like; TIGRFAM: nitrate transport ATP-binding subunits C and D; COGs: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component; InterPro IPR017871:IPR003439:IPR005890:IPR003593; KEGG: cyc:PCC7424_3525 nitrate ABC transporter, ATPase subunits C and D; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Nitrate ABC transporter, ATPase subunits C and D; TIGRFAM: nitrate ABC transporter, ATPase subunits C and D.
  
  
 0.449
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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