STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ47935.1KEGG: sun:SUN_1730 hypothetical protein; SPTR: Putative uncharacterized protein. (70 aa)    
Predicted Functional Partners:
AFZ47936.1
KEGG: mmr:Mmar10_1834 hypothetical protein; SPTR: Putative enzyme; manually curated.
       0.757
AFZ47937.1
KEGG: cyh:Cyan8802_3813 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.615
AFZ47938.1
KEGG: mar:MAE_49910 nucleotide-diphospho-sugar transferases superfamily protein; SPTR: Nucleotide-diphospho-sugar transferases superfamily.
       0.447
AFZ47934.1
KEGG: mco:MCJ_001660 glutamyl-tRNA amidotransferase subunit B.
       0.436
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.