STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ47939.1KEGG: cyc:PCC7424_0368 hypothetical protein; SPTR: Putative uncharacterized protein. (154 aa)    
Predicted Functional Partners:
AFZ47689.1
Hypothetical protein; PFAM: Domain of unknown function (DUF1868); KEGG: cyh:Cyan8802_4219 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.708
AFZ47940.1
Integral membrane sensor hybrid histidine kinase; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; COGs: COG0642 Signal transduction histidine kinase; InterProIPR003660:IPR003661:IPR003594:IPR001789:IPR 005467:IPR004358; KEGG: amr:AM1_1870 two-component hybrid sensor and regulator histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; response regulator receiver; SMART: response regulator receive [...]
       0.549
AFZ46976.1
KEGG: cyt:cce_2996 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.491
AFZ47457.1
PFAM: PBS lyase HEAT-like repeat; InterPro IPR004155; KEGG: cyc:PCC7424_1681 PBS lyase heat domain protein repeat-containing protein; PFAM: PBS lyase HEAT domain protein repeat-containing protein; SPTR: PBS lyase HEAT-like repeat domain protein.
  
     0.486
AFZ47999.1
PFAM: Tellurite resistance protein TerB; KEGG: cyt:cce_0541 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated.
  
     0.469
AFZ46818.1
Histidine triad (HIT) protein; PFAM: HIT domain; COGs: COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase; InterPro IPR001310:IPR019808:IPR013217; KEGG: npu:Npun_R5221 histidine triad (HIT) protein; PFAM: histidine triad (HIT) protein; Methyltransferase type 12; SPTR: Putative uncharacterized protein.
  
     0.460
AFZ46515.1
KEGG: cyc:PCC7424_5030 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.454
AFZ48048.1
KEGG: cyh:Cyan8802_2119 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.440
AFZ46468.1
KEGG: cyp:PCC8801_0555 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.438
AFZ48595.1
Hypothetical protein; PFAM: Uncharacterised BCR, COG1649; KEGG: cyc:PCC7424_1578 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.438
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.