STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ47943.1KEGG: cyc:PCC7424_2081 hypothetical protein; SPTR: Putative uncharacterized protein. (170 aa)    
Predicted Functional Partners:
AFZ47944.1
KEGG: cyh:Cyan8802_2724 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.945
AFZ48787.1
KEGG: cyc:PCC7424_1178 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.703
AFZ46678.1
KEGG: cyh:Cyan8802_1198 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.612
AFZ47293.1
KEGG: mar:MAE_52960 hypothetical protein; SPTR: Similar to P74790_SYNY3 Ssr0349 protein.
  
     0.597
AFZ48182.1
PFAM: Oxygen evolving enhancer protein 3 (PsbQ); TIGRFAM: photosystem II protein PsbQ; InterPro IPR017487; KEGG: mar:MAE_50080 photosystem II extrinsic protein; SPTR: Photosystem II extrinsic protein; TIGRFAM: photosystem II protein PsbQ.
  
     0.580
AFZ46977.1
KEGG: ter:Tery_1601 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.569
AFZ48803.1
Beta-lactamase domain protein; PFAM: Metallo-beta-lactamase superfamily; COGs: COG1236 exonuclease of the beta-lactamase fold involved in RNA processing; InterPro IPR001307; KEGG: cyc:PCC7424_1448 beta-lactamase domain protein; SPTR: Beta-lactamase domain protein.
  
     0.554
AFZ48574.1
Response regulator receiver; PFAM: Protein of unknown function (DUF3685); InterPro IPR001789:IPR016837; KEGG: cyc:PCC7424_0462 response regulator receiver protein; PFAM: response regulator receiver; SPTR: Response regulator receiver protein.
  
     0.548
AFZ47241.1
KEGG: cyt:cce_3573 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.546
AFZ47159.1
PFAM: Protein of unknown function (DUF3571); KEGG: cyt:cce_0819 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.494
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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