Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AFZ47954.1KEGG: cyc:PCC7424_5184 hypothetical protein; SPTR: Putative uncharacterized protein. (638 aa)    
Predicted Functional Partners:
AFZ48071.1
KEGG: mar:MAE_38030 hypothetical protein; SPTR: Putative uncharacterized protein.
  
 
   0.786
AFZ47458.1
KEGG: mar:MAE_04000 glycogen debranching enzyme; SPTR: Glycogen debranching enzyme.
  
     0.773
AFZ48574.1
Response regulator receiver; PFAM: Protein of unknown function (DUF3685); InterPro IPR001789:IPR016837; KEGG: cyc:PCC7424_0462 response regulator receiver protein; PFAM: response regulator receiver; SPTR: Response regulator receiver protein.
  
     0.770
AFZ46922.1
PFAM: Protein of unknown function (DUF3038); KEGG: cyt:cce_3697 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.769
AFZ46678.1
KEGG: cyh:Cyan8802_1198 hypothetical protein; SPTR: Putative uncharacterized protein.
  
 
   0.768
AFZ48447.1
KEGG: cyc:PCC7424_4615 hypothetical protein; SPTR: Putative uncharacterized protein.
  
 
   0.766
AFZ47123.1
KEGG: cyh:Cyan8802_2316 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.764
AFZ47753.1
KEGG: mar:MAE_35700 hypothetical protein; SPTR: Similar to tr|Q8YR03|Q8YR03.
  
     0.763
AFZ46897.1
PFAM: Protein of unknown function (DUF1239); InterPro IPR010664; KEGG: cyc:PCC7424_0097 protein of unknown function DUF1239; PFAM: protein of unknown function DUF1239; SPTR: Putative uncharacterized protein.
  
     0.760
AFZ46258.1
PFAM: Protein of unknown function (DUF2949); KEGG: cyc:PCC7424_0922 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.758
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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