STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ47955.1Hypothetical protein; PFAM: Domain of unknown function (DUF697); KEGG: cyc:PCC7424_4193 hypothetical protein; SPTR: Putative uncharacterized protein. (469 aa)    
Predicted Functional Partners:
AFZ48199.1
PFAM: Ankyrin repeat; COGs: COG0666 FOG: Ankyrin repeat; InterPro IPR002110:IPR020683:IPR004172; KEGG: cyc:PCC7424_2151 ankyrin; PFAM: Ankyrin; SPTR: Ankyrin.
  
 0.810
AFZ47788.1
Glucosylceramidase; PFAM: beta-Glucocerebrosidase 2 N terminal; Protein of unknown function, DUF608; COGs: COG4354 bile acid beta-glucosidase; InterPro IPR014551; KEGG: cyc:PCC7424_0277 protein of unknown function DUF608; PRIAM: Glucosylceramidase; SPTR: Putative uncharacterized protein.
    
 0.784
AFZ47956.1
Protein of unknown function DUF2064; PFAM: Uncharacterized protein conserved in bacteria (DUF2064); COGs: COG3222 conserved hypothetical protein; InterPro IPR018641; KEGG: cyh:Cyan8802_2226 hypothetical protein; PFAM: Protein of unknown function DUF2064; SPTR: Putative uncharacterized protein.
       0.773
AFZ48221.1
PFAM: Protein of unknown function (DUF3086); KEGG: cyc:PCC7424_5081 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.711
AFZ47166.1
KEGG: cyp:PCC8801_4335 hypothetical protein; SPTR: Putative uncharacterized protein.
  
 
  0.704
AFZ47313.1
KEGG: cyt:cce_0366 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.698
AFZ47954.1
KEGG: cyc:PCC7424_5184 hypothetical protein; SPTR: Putative uncharacterized protein.
 
 
   0.698
AFZ46983.1
KEGG: cyc:PCC7424_4185 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.694
ndhL
NAD(P)H-quinone oxidoreductase subunit L; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.
  
     0.680
AFZ46720.1
PFAM: Protein of unknown function (DUF3318); KEGG: cyt:cce_3430 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.671
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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