STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ47985.1KEGG: syn:slr1601 hypothetical protein; SPTR: Slr1601 protein. (134 aa)    
Predicted Functional Partners:
AFZ47827.1
KEGG: ava:Ava_3212 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.633
AFZ47209.1
KEGG: syn:slr0238 hypothetical protein; SPTR: Slr0238 protein.
  
     0.617
AFZ47787.1
PFAM: Protein of unknown function (DUF3352); KEGG: cyc:PCC7424_1390 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.616
AFZ48168.1
KEGG: ava:Ava_2463 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.609
AFZ46674.1
KEGG: syn:slr1826 hypothetical protein; SPTR: Slr1826 protein.
  
     0.602
AFZ46345.1
PFAM: Alpha/beta hydrolase of unknown function (DUF1400); InterPro IPR010802; KEGG: cyt:cce_1419 hypothetical protein; PFAM: protein of unknown function DUF1400; SPTR: Putative uncharacterized protein.
  
     0.585
AFZ46678.1
KEGG: cyh:Cyan8802_1198 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.582
AFZ46008.1
PFAM: Protein of unknown function (DUF1049); KEGG: cyh:Cyan8802_1369 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.580
AFZ48439.1
Abortive infection protein; PFAM: CAAX amino terminal protease family; InterPro IPR003675; KEGG: cyc:PCC7424_5328 abortive infection protein; PFAM: Abortive infection protein; SPTR: Abortive infection protein.
  
     0.574
AFZ48530.1
PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family; COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterPro IPR006145:IPR006224; KEGG: ava:Ava_3138 pseudouridine synthase; PFAM: pseudouridine synthase; SPTR: Pseudouridine synthase.
  
     0.551
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.