STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ48002.1PFAM: Protein of unknown function, DUF482; COGs: COG3146 conserved hypothetical protein; InterPro IPR007434; KEGG: cyt:cce_3020 hypothetical protein; PFAM: protein of unknown function DUF482; SPTR: Putative uncharacterized protein. (412 aa)    
Predicted Functional Partners:
AFZ47168.1
PFAM: Protein of unknown function (DUF938); InterPro IPR010342; KEGG: mar:MAE_56670 hypothetical protein; PFAM: protein of unknown function DUF938; SPTR: Similar to tr|Q10VL3|Q10VL3_TRIEI Hypothetical protein.
 
     0.560
AFZ48003.1
PFAM: Aminotransferase class I and II; COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004839:IPR004838:IPR000425:IPR001176; KEGG: ava:Ava_2127 aspartate aminotransferase; PFAM: aminotransferase class I and II; SPTR: Aminotransferase.
       0.445
AFZ46257.1
Protein of unknown function DUF192; PFAM: Uncharacterized ACR, COG1430; COGs: COG1430 conserved hypothetical protein; InterPro IPR003795; KEGG: cyh:Cyan8802_2350 protein of unknown function DUF192; PFAM: protein of unknown function DUF192; SPTR: Putative uncharacterized protein.
  
     0.439
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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