STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ48019.1PFAM: YcfA-like protein; InterPro IPR012933; KEGG: cyc:PCC7424_4650 YcfA family protein; PFAM: YcfA family protein; SPTR: YcfA family protein. (75 aa)    
Predicted Functional Partners:
AFZ48020.1
PFAM: Uncharacterised protein family (UPF0150); InterPro IPR005357; KEGG: cyc:PCC7424_4651 protein of unknown function UPF0150; PFAM: Uncharacterised protein family UPF0150; SPTR: Putative uncharacterized protein.
 
 
 
 0.963
AFZ48021.1
PFAM: Uncharacterised protein family (UPF0150); InterPro IPR005357; KEGG: cyt:cce_2835 hypothetical protein; PFAM: Uncharacterised protein family UPF0150; SPTR: Putative uncharacterized protein.
 
 
 
 0.920
AFZ46959.1
PFAM: Uncharacterised protein family (UPF0150); InterPro IPR005357; KEGG: mar:MAE_15410 hypothetical protein; PFAM: Uncharacterised protein family UPF0150; SPTR: Putative uncharacterized protein.
  
 
 
 0.618
AFZ48022.1
PFAM: YcfA-like protein; InterPro IPR012933; KEGG: tye:THEYE_A0467 hypothetical protein; PFAM: YcfA family protein; SPTR: Conserved domain protein.
 
    
0.569
AFZ46130.1
KEGG: cyh:Cyan8802_2275 hypothetical protein; SPTR: Putative uncharacterized protein.
  
 
 
 0.533
AFZ46363.1
PFAM: Uncharacterised protein family (UPF0150); InterPro IPR005357; KEGG: cyp:PCC8801_4121 protein of unknown function UPF0150; PFAM: Uncharacterised protein family UPF0150; SPTR: Putative uncharacterized protein; manually curated.
  
 
 
 0.513
AFZ48018.1
Addiction module killer protein; PFAM: Phage derived protein Gp49-like (DUF891); TIGRFAM: putative addiction module killer protein; COGs: COG3657 conserved hypothetical protein; InterPro IPR014056:IPR009241; KEGG: ana:all2402 hypothetical protein; PFAM: protein of unknown function DUF891; SPTR: All2402 protein; TIGRFAM: addiction module killer protein.
     
 0.438
AFZ48017.1
KEGG: dat:HRM2_26430 putative transcriptional regulator; SPTR: Similar to transcriptional regulator.
       0.437
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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