STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ48057.1PFAM: Protein of unknown function (DUF820); COGs: COG4636 conserved hypothetical protein; InterPro IPR008538; KEGG: cyc:PCC7424_3655 protein of unknown function DUF820; PFAM: protein of unknown function DUF820; SPTR: Putative uncharacterized protein. (187 aa)    
Predicted Functional Partners:
AFZ47704.1
PFAM: Protein of unknown function (DUF820); COGs: COG4636 conserved hypothetical protein; InterPro IPR008538; KEGG: cyc:PCC7424_1832 protein of unknown function DUF820; PFAM: protein of unknown function DUF820; SPTR: Putative uncharacterized protein.
  
   
 0.786
AFZ47778.1
PFAM: Protein of unknown function (DUF820); COGs: COG4636 conserved hypothetical protein; InterPro IPR008538; KEGG: syn:slr2084 hypothetical protein; PFAM: protein of unknown function DUF820; SPTR: Slr2084 protein.
  
     0.766
AFZ47849.1
PFAM: Protein of unknown function (DUF820); COGs: COG4636 conserved hypothetical protein; InterPro IPR008538; KEGG: cyc:PCC7424_4107 protein of unknown function DUF820; PFAM: protein of unknown function DUF820; SPTR: Putative uncharacterized protein.
  
     0.666
AFZ47229.1
PFAM: Protein of unknown function (DUF820); COGs: COG4636 conserved hypothetical protein; InterPro IPR008538; KEGG: cyp:PCC8801_1385 protein of unknown function DUF820; PFAM: protein of unknown function DUF820; SPTR: Putative uncharacterized protein.
  
     0.627
AFZ48658.1
PFAM: Protein of unknown function (DUF820); InterPro IPR008538; KEGG: cyc:PCC7424_1433 protein of unknown function DUF820; PFAM: protein of unknown function DUF820; SPTR: Putative uncharacterized protein.
  
     0.613
AFZ46547.1
Protein of unknown function DUF2358; PFAM: Uncharacterized conserved protein (DUF2358); InterPro IPR018790; KEGG: mar:MAE_47980 hypothetical protein; PFAM: Protein of unknown function DUF2358; SPTR: Similar to tr|Q4C2B1|Q4C2B1_CROWT Hypothetical protein.
  
     0.570
AFZ48654.1
PFAM: Protein of unknown function (DUF820); COGs: COG4636 conserved hypothetical protein; InterPro IPR008538; KEGG: npu:Npun_F1244 hypothetical protein; PFAM: protein of unknown function DUF820; SPTR: Putative uncharacterized protein.
  
     0.562
AFZ47405.1
PFAM: Protein of unknown function (DUF820); COGs: COG4636 conserved hypothetical protein; InterPro IPR008538; KEGG: cyh:Cyan8802_3475 protein of unknown function DUF820; PFAM: protein of unknown function DUF820; SPTR: Putative uncharacterized protein.
  
     0.538
AFZ48058.1
Tetratricopeptide TPR_1 repeat-containing protein; PFAM: Tetratricopeptide repeat; Uncharacterised Sugar-binding Domain; COGs: COG4995 conserved hypothetical protein; InterPro IPR001440:IPR019734:IPR013026:IPR002151; KEGG: ter:Tery_3497 peptidase-like; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Kinesin light chain-like protein.
       0.521
AFZ46203.1
PFAM: Protein of unknown function (DUF820); COGs: COG4636 conserved hypothetical protein; InterPro IPR008538; KEGG: ana:alr1821 hypothetical protein; PFAM: protein of unknown function DUF820; SPTR: Putative uncharacterized protein.
  
     0.440
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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