STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ48077.1Transposase; PFAM: Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region; COGs: COG0675 Transposase and inactivated derivatives; InterPro IPR010095; KEGG: mar:MAE_33840 transposase; PFAM: transposase IS605 OrfB; SPTR: Transposase, IS605 OrfB; TIGRFAM: transposase, IS605 OrfB family. (459 aa)    
Predicted Functional Partners:
AFZ46107.1
KEGG: mar:MAE_13220 putative glycosyl transferase; SPTR: Putative glycosyl transferase.
  
     0.643
AFZ46783.1
KEGG: ana:alr1868 hypothetical protein; SPTR: Alr1868 protein.
  
     0.636
AFZ48078.1
KEGG: cyc:PCC7424_3143 CopG domain protein DNA-binding domain protein; SPTR: CopG domain protein DNA-binding domain protein.
       0.565
AFZ47874.1
Hypothetical protein; COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); KEGG: cyc:PCC7424_2991 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.557
AFZ46235.1
KEGG: amr:AM1_3911 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.555
AFZ47330.1
KEGG: amr:AM1_3911 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.549
AFZ48076.1
PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16); COGs: COG0612 Zn-dependent peptidase; InterPro IPR011765:IPR007863; KEGG: cyc:PCC7424_2345 peptidase M16 domain protein; PFAM: peptidase M16 domain protein; SPTR: Insulinase-like:Peptidase M16, C-terminal.
       0.535
AFZ48283.1
KEGG: cyc:PCC7424_1938 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.530
AFZ46989.1
COGs: COG1112 Superfamily I DNA and RNA helicase and helicase subunits; KEGG: pna:Pnap_4258 superfamily I DNA/RNA helicase; SPTR: Putative uncharacterized protein.
  
     0.494
AFZ46150.1
Hypothetical protein; KEGG: mar:MAE_56470 porin type major outer membrane protein like; SPTR: Porin type major outer membrane protein like.
  
     0.476
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.