STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ48270.1Hypothetical protein; KEGG: gga:421808 mitogen-activated protein kinase kinase kinase 7; SPTR: Putative uncharacterized protein. (277 aa)    
Predicted Functional Partners:
AFZ48271.1
PFAM: Predicted permease YjgP/YjgQ family; COGs: COG0795 permease; InterPro IPR005495; KEGG: cyt:cce_2027 putative permease YjgP/YjgQ; PFAM: permease YjgP/YjgQ family protein; SPTR: Putative permease YjgP/YjgQ.
       0.590
AFZ48272.1
PFAM: ABC transporter; COGs: COG1137 ABC-type (unclassified) transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: syp:SYNPCC7002_A0769 ABC-type transport protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC-type transport protein.
       0.590
AFZ48269.1
Serine O-acetyltransferase; PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: serine O-acetyltransferase; COGs: COG1045 Serine acetyltransferase; InterPro IPR018357:IPR001451:IPR005881; KEGG: cyc:PCC7424_3701 serine O-acetyltransferase; SPTR: Serine O-acetyltransferase; TIGRFAM: serine O-acetyltransferase.
       0.554
AFZ48273.1
PFAM: OstA-like protein; COGs: COG1934 conserved hypothetical protein; InterPro IPR005653; KEGG: syn:slr0250 hypothetical protein; PFAM: OstA family protein; SPTR: OstA family protein.
       0.503
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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