STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ48275.1PFAM: Protein of unknown function (DUF3134); KEGG: cyt:cce_0911 hypothetical protein; SPTR: Putative uncharacterized protein. (84 aa)    
Predicted Functional Partners:
AFZ46714.1
KEGG: cyt:cce_0318 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.721
AFZ46976.1
KEGG: cyt:cce_2996 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.720
AFZ48595.1
Hypothetical protein; PFAM: Uncharacterised BCR, COG1649; KEGG: cyc:PCC7424_1578 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.709
AFZ48558.1
PFAM: Domain of unknown function (DUF1824); InterPro IPR014953; KEGG: cyc:PCC7424_2049 hypothetical protein; PFAM: Domain of unknown function DUF1824; SPTR: Putative uncharacterized protein.
  
     0.700
AFZ46848.1
PFAM: Protein of unknown function (DUF2993); KEGG: cyt:cce_0443 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.698
AFZ48274.1
Fibrillin; PFAM: PAP_fibrillin; KEGG: syn:sll1568 fibrillin; SPTR: Fibrillin.
 
     0.673
AFZ48292.1
PFAM: Peptidase family M48; InterPro IPR001915; KEGG: cyh:Cyan8802_2623 peptidase M56 BlaR1; PFAM: peptidase M48 Ste24p; SPTR: Peptidase M56 BlaR1.
  
     0.653
AFZ48322.1
PFAM: Protein of unknown function (DUF3120); KEGG: cyc:PCC7424_4190 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.644
AFZ46220.1
KEGG: syp:SYNPCC7002_A2388 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.641
AFZ48273.1
PFAM: OstA-like protein; COGs: COG1934 conserved hypothetical protein; InterPro IPR005653; KEGG: syn:slr0250 hypothetical protein; PFAM: OstA family protein; SPTR: OstA family protein.
 
     0.640
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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