STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ48317.1HAD superfamily (subfamily IA) hydrolase, TIGR01548; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548; COGs: COG0546 phosphatase; InterPro IPR006438; KEGG: ter:Tery_3452 HAD family hydrolase; SPTR: HAD superfamily (Subfamily IA) hydrolase, TIGR01548; TIGRFAM: HAD superfamily (subfamily IA) hydrolase, TIGR01548. (256 aa)    
Predicted Functional Partners:
AFZ48316.1
Ribosomal protein PSRP-3/Ycf65; Probably a ribosomal protein or a ribosome-associated protein; Belongs to the chloroplast-specific ribosomal protein cS23 family.
 
     0.656
AFZ48729.1
KEGG: ana:alr3583 hypothetical protein; SPTR: Alr3583 protein.
  
    0.654
AFZ47801.1
Hypothetical protein; InterPro IPR020336; KEGG: npu:Npun_R0316 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.566
AFZ47874.1
Hypothetical protein; COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); KEGG: cyc:PCC7424_2991 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.565
hisC
PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase; COGs: COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; InterPro IPR004839:IPR005861; KEGG: syp:SYNPCC7002_A0511 histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; SPTR: Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
 
  
 0.546
AFZ48581.1
PFAM: rod shape-determining protein MreD; TIGRFAM: rod shape-determining protein MreD; InterPro IPR007227; KEGG: cyc:PCC7424_3389 rod shape-determining protein MreD; SPTR: Putative uncharacterized protein; TIGRFAM: rod shape-determining protein MreD.
  
     0.505
AFZ46264.1
AMP-dependent synthetase and ligase; PFAM: AMP-binding enzyme; COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR020845:IPR000873; KEGG: cyc:PCC7424_1874 beta-ketoacyl synthase; PFAM: AMP-dependent synthetase and ligase; SPTR: Beta-ketoacyl synthase.
  
  
 0.492
AFZ46265.1
Beta-ketoacyl synthase; PFAM: Acyl transferase domain; Phosphopantetheine attachment site; KR domain; Beta-ketoacyl synthase, N-terminal domain; AMP-binding enzyme; Sulfotransferase domain; Beta-ketoacyl synthase, C-terminal domain; COGs: COG3321 Polyketide synthase modules and related protein; InterProIPR000639:IPR009081:IPR006162:IPR018201:IPR 000873:IPR006163:IPR014030:IPR014031:IPR014043:IPR013968:I PR000863:IPR000073; KEGG: cyc:PCC7424_1874 beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase; phosphopantetheine-binding; AMP-dependent synthetase and ligase; Acyl transferase; KR do [...]
  
  
 0.492
AFZ46520.1
PFAM: Protein of unknown function (DUF3155); KEGG: mar:MAE_14400 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.489
AFZ46818.1
Histidine triad (HIT) protein; PFAM: HIT domain; COGs: COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase; InterPro IPR001310:IPR019808:IPR013217; KEGG: npu:Npun_R5221 histidine triad (HIT) protein; PFAM: histidine triad (HIT) protein; Methyltransferase type 12; SPTR: Putative uncharacterized protein.
 
 
 0.479
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.