STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ48342.1KEGG: cyc:PCC7424_0302 hypothetical protein; SPTR: Putative uncharacterized protein. (446 aa)    
Predicted Functional Partners:
AFZ48029.1
SMC domain protein; TIGRFAM: DNA sulfur modification protein DndD; COGs: COG0419 ATPase involved in DNA repair; InterPro IPR003395; KEGG: cyh:Cyan8802_2920 hypothetical protein; PFAM: SMC domain protein; SPTR: Putative uncharacterized protein.
  
   0.762
AFZ47350.1
TIGRFAM: DNA sulfur modification protein DndD; COGs: COG0419 ATPase involved in DNA repair; InterPro IPR017599:IPR017871; KEGG: cyt:cce_0213 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: DNA sulfur modification protein DndD.
  
   0.739
AFZ47027.1
KEGG: cyc:PCC7424_1174 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.731
AFZ46559.1
TIGRFAM: dnd system-associated protein 4; KEGG: cyt:cce_2948 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.726
AFZ46337.1
DNA sulfur modification protein DndE; PFAM: Domain of unknown function (DUF1832); TIGRFAM: DNA sulfur modification protein DndE; InterPro IPR014969; KEGG: ana:alr4922 hypothetical protein; PFAM: Domain of unknown function DUF1832; SPTR: Alr4922 protein; TIGRFAM: DNA sulfur modification protein DndE.
  
     0.714
AFZ46674.1
KEGG: syn:slr1826 hypothetical protein; SPTR: Slr1826 protein.
  
     0.699
AFZ47467.1
Hypothetical protein; KEGG: cyh:Cyan8802_0343 putative transmembrane anti-sigma factor; SPTR: Putative transmembrane anti-sigma factor.
  
     0.691
AFZ48343.1
KEGG: syp:SYNPCC7002_A0777 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.686
AFZ46479.1
PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit; TIGRFAM: DNA phosphorothioation system restriction enzyme; COGs: COG1061 DNA or RNA helicase of superfamily II; InterPro IPR006935:IPR001650:IPR014021:IPR014001; KEGG: cyt:cce_0895 hypothetical protein; PFAM: type III restriction protein res subunit; helicase domain protein; SMART: helicase domain protein; DEAD-like helicase; SPTR: Putative uncharacterized protein.
  
 
   0.666
AFZ47845.1
KEGG: mar:MAE_41110 hypothetical protein; SPTR: Putative uncharacterized protein ycf39.
  
     0.648
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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