STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ48375.1KEGG: cyc:PCC7424_1119 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated. (76 aa)    
Predicted Functional Partners:
AFZ46310.1
KEGG: cyc:PCC7424_3400 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.755
AFZ47827.1
KEGG: ava:Ava_3212 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.731
AFZ47498.1
KEGG: cyh:Cyan8802_3018 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.722
AFZ48502.1
PFAM: von Willebrand factor type A domain; InterPro IPR002035; KEGG: cyh:Cyan8802_0675 von Willebrand factor type A; SMART: von Willebrand factor type A; SPTR: von Willebrand factor type A.
  
     0.660
AFZ47845.1
KEGG: mar:MAE_41110 hypothetical protein; SPTR: Putative uncharacterized protein ycf39.
  
     0.657
AFZ48439.1
Abortive infection protein; PFAM: CAAX amino terminal protease family; InterPro IPR003675; KEGG: cyc:PCC7424_5328 abortive infection protein; PFAM: Abortive infection protein; SPTR: Abortive infection protein.
  
     0.657
AFZ48265.1
Peptidase C14 caspase catalytic subunit p20; PFAM: Caspase domain; InterPro IPR011600:IPR017909:IPR011189; KEGG: cyp:PCC8801_0557 peptidase C14 caspase catalytic subunit P20; PFAM: peptidase C14 caspase catalytic subunit p20; SPTR: Peptidase C14 caspase catalytic subunit p20.
  
     0.630
AFZ46022.1
KEGG: cyc:PCC7424_1151 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.627
AFZ46008.1
PFAM: Protein of unknown function (DUF1049); KEGG: cyh:Cyan8802_1369 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.624
AFZ46368.1
PpiC-type peptidyl-prolyl cis-trans isomerase; PFAM: PPIC-type PPIASE domain; InterPro IPR000297; KEGG: mar:MAE_54540 PpiC-type peptidyl-prolyl cis-trans isomerase; SPTR: PpiC-type peptidyl-prolyl cis-trans isomerase.
  
     0.623
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.